Canonical Allele Identifier: CA022692
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 91267
dbSNP Id: rs63751107
gnomAD v2: 2-47630427-A-C
gnomAD v3: 2-47403288-A-C
gnomAD v4: 2-47403288-A-C

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47403288A>C , CM000664.2:g.47403288A>C GRCh38
NC_000002.11:g.47630427A>C , CM000664.1:g.47630427A>C GRCh37
NC_000002.10:g.47483931A>C NCBI36
NG_007110.2:g.5165A>C , LRG_218:g.5165A>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000644900.2:c.97A>C ENSP00000495641.2:p.Thr33Pro
ENST00000233146.7:c.97A>C MANE Select ENSP00000233146.2:p.Thr33Pro
ENST00000543555.6:c.-30-72A>C ENSP00000442697.1:n.-30-72A>C
ENST00000644092.1:c.97A>C ENSP00000496351.1:p.Thr33Pro
ENST00000645339.1:c.97A>C ENSP00000496441.1:p.Thr33Pro
ENST00000645506.1:c.97A>C ENSP00000495455.1:p.Thr33Pro
ENST00000646415.1:c.97A>C ENSP00000495543.1:p.Thr33Pro
ENST00000233146.6:c.97A>C ENSP00000233146.2:p.Thr33Pro
ENST00000406134.5:c.97A>C ENSP00000384199.1:p.Thr33Pro
ENST00000454849.5:c.-30-72A>C ENSP00000411482.1:n.-30-72A>C
ENST00000543555.5:c.-30-72A>C ENSP00000442697.1:n.-30-72A>C
ENST00000610696.4:c.97A>C ENSP00000483159.1:p.Thr33Pro
ENST00000613514.4:c.97A>C ENSP00000484137.1:p.Thr33Pro
ENST00000617333.3:c.97A>C ENSP00000482468.1:p.Thr33Pro
ENST00000617938.4:c.97A>C ENSP00000481158.1:p.Thr33Pro
ENST00000621359.2:c.97A>C ENSP00000481416.1:p.Thr33Pro
NM_000251.2:c.97A>C , LRG_218t1:c.97A>C NP_000242.1:p.Thr33Pro
NM_001258281.1:c.-30-72A>C NP_001245210.1:n.-30-72A>C
XM_005264332.2:c.97A>C XP_005264389.2:p.Thr33Pro
XM_011532867.1:c.97A>C XP_011531169.1:p.Thr33Pro
XR_939685.1:n.169A>C
XM_005264332.4:c.97A>C XP_005264389.2:p.Thr33Pro
XM_011532867.2:c.97A>C XP_011531169.1:p.Thr33Pro
XR_001738747.2:n.159A>C
XR_939685.2:n.159A>C
NM_000251.3:c.97A>C MANE Select NP_000242.1:p.Thr33Pro