Canonical Allele Identifier: CA020808

Gene: MSH2

Linked Data

• ClinVar Variation Id: 141032
• ClinVar RCV Id: RCV000129363 ; RCV000212581 ; RCV000233259 ; RCV000662735 ; RCV003997495
• dbSNP Id: rs587781447
• ExAC: 2:47635588 C / G
• gnomAD v2: 2-47635588-C-G
• gnomAD v3: 2-47408449-C-G
• gnomAD v4: 2-47408449-C-G
• MyVariant Identifiers: chr2:g.47635588C>G (hg19) ; chr2:g.47408449C>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47408449C>G , CM000664.2:g.47408449C>G	GRCh38
NC_000002.11:g.47635588C>G , CM000664.1:g.47635588C>G	GRCh37
NC_000002.10:g.47489092C>G	NCBI36
NG_007110.2:g.10326C>G , LRG_218:g.10326C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.260C>G	ENSP00000495641.2:p.Ser87Cys
ENST00000233146.7:c.260C>G MANE Select	ENSP00000233146.2:p.Ser87Cys
ENST00000543555.6:c.62C>G	ENSP00000442697.1:p.Ser21Cys
ENST00000644092.1:c.260C>G	ENSP00000496351.1:p.Ser87Cys
ENST00000645339.1:c.260C>G	ENSP00000496441.1:p.Ser87Cys
ENST00000645506.1:c.260C>G	ENSP00000495455.1:p.Ser87Cys
ENST00000646415.1:c.260C>G	ENSP00000495543.1:p.Ser87Cys
ENST00000233146.6:c.260C>G	ENSP00000233146.2:p.Ser87Cys
ENST00000406134.5:c.260C>G	ENSP00000384199.1:p.Ser87Cys
ENST00000454849.5:c.62C>G	ENSP00000411482.1:p.Ser21Cys
ENST00000543555.5:c.62C>G	ENSP00000442697.1:p.Ser21Cys
ENST00000610696.4:c.260C>G	ENSP00000483159.1:p.Ser87Cys
ENST00000613514.4:c.260C>G	ENSP00000484137.1:p.Ser87Cys
ENST00000617333.3:c.260C>G	ENSP00000482468.1:p.Ser87Cys
ENST00000617938.4:c.260C>G	ENSP00000481158.1:p.Ser87Cys
ENST00000621359.2:c.260C>G	ENSP00000481416.1:p.Ser87Cys
NM_000251.2:c.260C>G , LRG_218t1:c.260C>G	NP_000242.1:p.Ser87Cys
NM_001258281.1:c.62C>G	NP_001245210.1:p.Ser21Cys
XM_005264332.2:c.260C>G	XP_005264389.2:p.Ser87Cys
XM_011532867.1:c.260C>G	XP_011531169.1:p.Ser87Cys
XR_939685.1:n.332C>G
XM_005264332.4:c.260C>G	XP_005264389.2:p.Ser87Cys
XM_011532867.2:c.260C>G	XP_011531169.1:p.Ser87Cys
XR_001738747.2:n.322C>G
XR_939685.2:n.322C>G
NM_000251.3:c.260C>G MANE Select	NP_000242.1:p.Ser87Cys