Canonical Allele Identifier: CA020680

Gene: MSH2

Linked Data

• ClinVar Variation Id: 186694
• ClinVar RCV Id: RCV000166329 ; RCV000232782 ; RCV001194027 ; RCV001594863 ; RCV003995501
• dbSNP Id: rs747700106
• ExAC: 2:47707904 G / A
• gnomAD v2: 2-47707904-G-A
• gnomAD v4: 2-47480765-G-A
• MyVariant Identifiers: chr2:g.47707904G>A (hg19) ; chr2:g.47480765G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47480765G>A , CM000664.2:g.47480765G>A	GRCh38
NC_000002.11:g.47707904G>A , CM000664.1:g.47707904G>A	GRCh37
NC_000002.10:g.47561408G>A	NCBI36
NG_007110.2:g.82642G>A , LRG_218:g.82642G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2528G>A	ENSP00000495641.2:p.Cys843Tyr
ENST00000233146.7:c.2528G>A MANE Select	ENSP00000233146.2:p.Cys843Tyr
ENST00000543555.6:c.2330G>A	ENSP00000442697.1:p.Cys777Tyr
ENST00000644092.1:c.*828G>A	ENSP00000496351.1:n.*828G>A
ENST00000644900.1:c.381G>A
ENST00000645339.1:c.2528G>A	ENSP00000496441.1:p.Cys843Tyr
ENST00000645506.1:c.2528G>A	ENSP00000495455.1:p.Cys843Tyr
ENST00000646415.1:c.2528G>A	ENSP00000495543.1:p.Cys843Tyr
ENST00000233146.6:c.2528G>A	ENSP00000233146.2:p.Cys843Tyr
ENST00000406134.5:c.2528G>A	ENSP00000384199.1:p.Cys843Tyr
ENST00000543555.5:c.2330G>A	ENSP00000442697.1:p.Cys777Tyr
ENST00000610696.4:c.*924G>A	ENSP00000483159.1:n.*924G>A
ENST00000613514.4:c.*1068G>A	ENSP00000484137.1:n.*1068G>A
ENST00000617333.3:c.*1294G>A	ENSP00000482468.1:n.*1294G>A
ENST00000617938.4:c.*1500G>A	ENSP00000481158.1:n.*1500G>A
ENST00000621359.2:c.*94G>A	ENSP00000481416.1:n.*94G>A
NM_000251.2:c.2528G>A , LRG_218t1:c.2528G>A	NP_000242.1:p.Cys843Tyr
NM_001258281.1:c.2330G>A	NP_001245210.1:p.Cys777Tyr
XM_005264332.2:c.2528G>A	XP_005264389.2:p.Cys843Tyr
XM_011532867.1:c.2528G>A	XP_011531169.1:p.Cys843Tyr
XR_939685.1:n.2600G>A
XM_005264332.4:c.2528G>A	XP_005264389.2:p.Cys843Tyr
XM_011532867.2:c.2528G>A	XP_011531169.1:p.Cys843Tyr
XR_001738747.2:n.2590G>A
XR_939685.2:n.2590G>A
NM_000251.3:c.2528G>A MANE Select	NP_000242.1:p.Cys843Tyr