Canonical Allele Identifier: CA020556
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 90965
dbSNP Id: rs201298777
gnomAD v2: 2-47705600-A-G
gnomAD v3: 2-47478461-A-G
gnomAD v4: 2-47478461-A-G

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47478461A>G , CM000664.2:g.47478461A>G GRCh38
NC_000002.11:g.47705600A>G , CM000664.1:g.47705600A>G GRCh37
NC_000002.10:g.47559104A>G NCBI36
NG_007110.2:g.80338A>G , LRG_218:g.80338A>G

Transcript Alleles

HGVS Amino-acid Change
ENST00000644900.2:c.2400A>G ENSP00000495641.2:p.Leu800=
ENST00000233146.7:c.2400A>G MANE Select ENSP00000233146.2:p.Leu800=
ENST00000543555.6:c.2202A>G ENSP00000442697.1:p.Leu734=
ENST00000644092.1:c.*700A>G ENSP00000496351.1:n.*700A>G
ENST00000644900.1:c.253A>G
ENST00000645339.1:c.2400A>G ENSP00000496441.1:p.Leu800=
ENST00000645506.1:c.2400A>G ENSP00000495455.1:p.Leu800=
ENST00000646415.1:c.2400A>G ENSP00000495543.1:p.Leu800=
ENST00000233146.6:c.2400A>G ENSP00000233146.2:p.Leu800=
ENST00000406134.5:c.2400A>G ENSP00000384199.1:p.Leu800=
ENST00000543555.5:c.2202A>G ENSP00000442697.1:p.Leu734=
ENST00000610696.4:c.*796A>G ENSP00000483159.1:n.*796A>G
ENST00000613514.4:c.*940A>G ENSP00000484137.1:n.*940A>G
ENST00000617333.3:c.*1166A>G ENSP00000482468.1:n.*1166A>G
ENST00000617938.4:c.*1372A>G ENSP00000481158.1:n.*1372A>G
ENST00000621359.2:c.2399A>G ENSP00000481416.1:p.Tyr800Cys
NM_000251.2:c.2400A>G , LRG_218t1:c.2400A>G NP_000242.1:p.Leu800=
NM_001258281.1:c.2202A>G NP_001245210.1:p.Leu734=
XM_005264332.2:c.2400A>G XP_005264389.2:p.Leu800=
XM_011532867.1:c.2400A>G XP_011531169.1:p.Leu800=
XR_939685.1:n.2472A>G
XM_005264332.4:c.2400A>G XP_005264389.2:p.Leu800=
XM_011532867.2:c.2400A>G XP_011531169.1:p.Leu800=
XR_001738747.2:n.2462A>G
XR_939685.2:n.2462A>G
NM_000251.3:c.2400A>G MANE Select NP_000242.1:p.Leu800=