Canonical Allele Identifier: CA019785

Gene: MSH2

Linked Data

• ClinVar Variation Id: 90854
• ClinVar RCV Id: RCV000076356 ; RCV000491447 ; RCV000581599 ; RCV000692084 ; RCV002477219 ; RCV003452879
• dbSNP Id: rs63751640
• MyVariant Identifiers: chr2:g.47703506G>T (hg19) ; chr2:g.47476367G>T (hg38)
• PubMed: PMID:26247049

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47476367G>T , CM000664.2:g.47476367G>T	GRCh38
NC_000002.11:g.47703506G>T , CM000664.1:g.47703506G>T	GRCh37
NC_000002.10:g.47557010G>T	NCBI36
NG_007110.2:g.78244G>T , LRG_218:g.78244G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2006G>T	ENSP00000495641.2:p.Gly669Val
ENST00000233146.7:c.2006G>T MANE Select	ENSP00000233146.2:p.Gly669Val
ENST00000543555.6:c.1808G>T	ENSP00000442697.1:p.Gly603Val
ENST00000644092.1:c.*306G>T	ENSP00000496351.1:n.*306G>T
ENST00000645339.1:c.2006G>T	ENSP00000496441.1:p.Gly669Val
ENST00000645506.1:c.2006G>T	ENSP00000495455.1:p.Gly669Val
ENST00000646415.1:c.2006G>T	ENSP00000495543.1:p.Gly669Val
ENST00000233146.6:c.2006G>T	ENSP00000233146.2:p.Gly669Val
ENST00000406134.5:c.2006G>T	ENSP00000384199.1:p.Gly669Val
ENST00000543555.5:c.1808G>T	ENSP00000442697.1:p.Gly603Val
ENST00000610696.4:c.*402G>T	ENSP00000483159.1:n.*402G>T
ENST00000613514.4:c.*546G>T	ENSP00000484137.1:n.*546G>T
ENST00000617333.3:c.*772G>T	ENSP00000482468.1:n.*772G>T
ENST00000617938.4:c.*978G>T	ENSP00000481158.1:n.*978G>T
ENST00000621359.2:c.2006G>T	ENSP00000481416.1:p.Gly669Val
NM_000251.2:c.2006G>T , LRG_218t1:c.2006G>T	NP_000242.1:p.Gly669Val
NM_001258281.1:c.1808G>T	NP_001245210.1:p.Gly603Val
XM_005264332.2:c.2006G>T	XP_005264389.2:p.Gly669Val
XM_011532867.1:c.2006G>T	XP_011531169.1:p.Gly669Val
XR_939685.1:n.2078G>T
XM_005264332.4:c.2006G>T	XP_005264389.2:p.Gly669Val
XM_011532867.2:c.2006G>T	XP_011531169.1:p.Gly669Val
XR_001738747.2:n.2068G>T
XR_939685.2:n.2068G>T
NM_000251.3:c.2006G>T MANE Select	NP_000242.1:p.Gly669Val