Canonical Allele Identifier: CA019186
Gene: SCN5A HGNC NCBI

Linked Data

ClinVar Variation Id: 201537
dbSNP Id: rs794728897
gnomAD v2: 3-38592485-A-T
gnomAD v3: 3-38550994-A-T
gnomAD v4: 3-38550994-A-T

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.38550994A>T , CM000665.2:g.38550994A>T GRCh38
NC_000003.11:g.38592485A>T , CM000665.1:g.38592485A>T GRCh37
NC_000003.10:g.38567489A>T NCBI36
NG_008934.1:g.103679T>A , LRG_289:g.103679T>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000327956.7:c.5375T>A ENSP00000333674.7:p.Met1792Lys
ENST00000333535.9:c.5378T>A ENSP00000328968.4:p.Met1793Lys
ENST00000413689.6:c.5378T>A MANE Plus Clinical ENSP00000410257.1:p.Met1793Lys
ENST00000423572.7:c.5375T>A MANE Select ENSP00000398266.2:p.Met1792Lys
ENST00000333535.8:c.5378T>A ENSP00000328968.4:p.Met1793Lys
ENST00000413689.5:c.5378T>A ENSP00000410257.1:p.Met1793Lys
ENST00000414099.6:c.5324T>A ENSP00000398962.2:p.Met1775Lys
ENST00000423572.6:c.5375T>A ENSP00000398266.2:p.Met1792Lys
ENST00000425664.5:c.5324T>A ENSP00000416634.1:p.Met1775Lys
ENST00000449557.6:c.5216T>A ENSP00000413996.2:p.Met1739Lys
ENST00000450102.6:c.5216T>A ENSP00000403355.2:p.Met1739Lys
ENST00000451551.6:c.5216T>A ENSP00000388797.2:p.Met1739Lys
ENST00000455624.6:c.5279T>A ENSP00000399524.2:p.Met1760Lys
NM_000335.4:c.5375T>A , LRG_289t2:c.5375T>A NP_000326.2:p.Met1792Lys
NM_001099404.1:c.5378T>A , LRG_289t3:c.5378T>A NP_001092874.1:p.Met1793Lys
NM_001099405.1:c.5324T>A NP_001092875.1:p.Met1775Lys
NM_001160160.1:c.5279T>A NP_001153632.1:p.Met1760Lys
NM_001160161.1:c.5216T>A NP_001153633.1:p.Met1739Lys
NM_198056.2:c.5378T>A , LRG_289t1:c.5378T>A NP_932173.1:p.Met1793Lys
XM_006713282.2:c.5378T>A XP_006713345.1:p.Met1793Lys
XM_011533991.1:c.5375T>A XP_011532293.1:p.Met1792Lys
XM_011533992.1:c.5249T>A XP_011532294.1:p.Met1750Lys
NM_001354701.1:c.5321T>A NP_001341630.1:p.Met1774Lys
XM_011533991.2:c.5375T>A XP_011532293.1:p.Met1792Lys
XM_017007017.1:c.5216T>A XP_016862506.1:p.Met1739Lys
NM_000335.5:c.5375T>A MANE Select NP_000326.2:p.Met1792Lys
NM_001160160.2:c.5279T>A NP_001153632.1:p.Met1760Lys
NM_001354701.2:c.5321T>A NP_001341630.1:p.Met1774Lys
NM_001099404.2:c.5378T>A MANE Plus Clinical NP_001092874.1:p.Met1793Lys
NM_001099405.2:c.5324T>A NP_001092875.1:p.Met1775Lys
NM_001160161.2:c.5216T>A NP_001153633.1:p.Met1739Lys
NM_198056.3:c.5378T>A NP_932173.1:p.Met1793Lys