Canonical Allele Identifier: CA019108

Gene: MSH2

Linked Data

• ClinVar Variation Id: 90760
• ClinVar RCV Id: RCV000076257 ; RCV002399460 ; RCV003452853
• dbSNP Id: rs63751298
• MyVariant Identifiers: chr2:g.47698162C>T (hg19) ; chr2:g.47471023C>T (hg38)
• PubMed: PMID:15849733 ; PMID:17267619 ; PMID:18550572

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47471023C>T , CM000664.2:g.47471023C>T	GRCh38
NC_000002.11:g.47698162C>T , CM000664.1:g.47698162C>T	GRCh37
NC_000002.10:g.47551666C>T	NCBI36
NG_007110.2:g.72900C>T , LRG_218:g.72900C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.1720C>T	ENSP00000495641.2:p.Gln574Ter
ENST00000233146.7:c.1720C>T MANE Select	ENSP00000233146.2:p.Gln574Ter
ENST00000543555.6:c.1522C>T	ENSP00000442697.1:p.Gln508Ter
ENST00000644092.1:c.*20C>T	ENSP00000496351.1:n.*20C>T
ENST00000645339.1:c.1720C>T	ENSP00000496441.1:p.Gln574Ter
ENST00000645506.1:c.1720C>T	ENSP00000495455.1:p.Gln574Ter
ENST00000646415.1:c.1720C>T	ENSP00000495543.1:p.Gln574Ter
ENST00000233146.6:c.1720C>T	ENSP00000233146.2:p.Gln574Ter
ENST00000406134.5:c.1720C>T	ENSP00000384199.1:p.Gln574Ter
ENST00000543555.5:c.1522C>T	ENSP00000442697.1:p.Gln508Ter
ENST00000610696.4:c.*116C>T	ENSP00000483159.1:n.*116C>T
ENST00000613514.4:c.*260C>T	ENSP00000484137.1:n.*260C>T
ENST00000617333.3:c.*486C>T	ENSP00000482468.1:n.*486C>T
ENST00000617938.4:c.*692C>T	ENSP00000481158.1:n.*692C>T
ENST00000621359.2:c.1720C>T	ENSP00000481416.1:p.Gln574Ter
NM_000251.2:c.1720C>T , LRG_218t1:c.1720C>T	NP_000242.1:p.Gln574Ter
NM_001258281.1:c.1522C>T	NP_001245210.1:p.Gln508Ter
XM_005264332.2:c.1720C>T	XP_005264389.2:p.Gln574Ter
XM_011532867.1:c.1720C>T	XP_011531169.1:p.Gln574Ter
XR_939685.1:n.1792C>T
XM_005264332.4:c.1720C>T	XP_005264389.2:p.Gln574Ter
XM_011532867.2:c.1720C>T	XP_011531169.1:p.Gln574Ter
XR_001738747.2:n.1782C>T
XR_939685.2:n.1782C>T
NM_000251.3:c.1720C>T MANE Select	NP_000242.1:p.Gln574Ter