Canonical Allele Identifier: CA017527
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 90569
dbSNP Id: rs146567853
gnomAD v2: 2-47657021-G-A
gnomAD v3: 2-47429882-G-A
gnomAD v4: 2-47429882-G-A
COSMIC: COSM168419

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47429882G>A , CM000664.2:g.47429882G>A GRCh38
NC_000002.11:g.47657021G>A , CM000664.1:g.47657021G>A GRCh37
NC_000002.10:g.47510525G>A NCBI36
NG_007110.2:g.31759G>A , LRG_218:g.31759G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000644900.2:c.1217G>A ENSP00000495641.2:p.Arg406Gln
ENST00000233146.7:c.1217G>A MANE Select ENSP00000233146.2:p.Arg406Gln
ENST00000543555.6:c.1019G>A ENSP00000442697.1:p.Arg340Gln
ENST00000644092.1:c.1217G>A ENSP00000496351.1:p.Arg406Gln
ENST00000645339.1:c.1217G>A ENSP00000496441.1:p.Arg406Gln
ENST00000645506.1:c.1217G>A ENSP00000495455.1:p.Arg406Gln
ENST00000646415.1:c.1217G>A ENSP00000495543.1:p.Arg406Gln
ENST00000233146.6:c.1217G>A ENSP00000233146.2:p.Arg406Gln
ENST00000406134.5:c.1217G>A ENSP00000384199.1:p.Arg406Gln
ENST00000543555.5:c.1019G>A ENSP00000442697.1:p.Arg340Gln
ENST00000610696.4:c.1217G>A ENSP00000483159.1:p.Arg406Gln
ENST00000613514.4:c.1217G>A ENSP00000484137.1:p.Arg406Gln
ENST00000617333.3:c.1216G>A ENSP00000482468.1:p.Asp406Asn
ENST00000617938.4:c.*189G>A ENSP00000481158.1:n.*189G>A
ENST00000621359.2:c.1217G>A ENSP00000481416.1:p.Arg406Gln
NM_000251.2:c.1217G>A , LRG_218t1:c.1217G>A NP_000242.1:p.Arg406Gln
NM_001258281.1:c.1019G>A NP_001245210.1:p.Arg340Gln
XM_005264332.2:c.1217G>A XP_005264389.2:p.Arg406Gln
XM_011532867.1:c.1217G>A XP_011531169.1:p.Arg406Gln
XR_939685.1:n.1289G>A
XM_005264332.4:c.1217G>A XP_005264389.2:p.Arg406Gln
XM_011532867.2:c.1217G>A XP_011531169.1:p.Arg406Gln
XR_001738747.2:n.1279G>A
XR_939685.2:n.1279G>A
NM_000251.3:c.1217G>A MANE Select NP_000242.1:p.Arg406Gln