Canonical Allele Identifier: CA013789

Linked Data

ClinVar Variation Id: 89445
dbSNP Id: rs587779282
gnomAD v2: 2-48033375-A-T
gnomAD v3: 2-47806236-A-T
gnomAD v4: 2-47806236-A-T

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47806236A>T , CM000664.2:g.47806236A>T GRCh38
NC_000002.11:g.48033375A>T , CM000664.1:g.48033375A>T GRCh37
NC_000002.10:g.47886879A>T NCBI36
NG_007111.1:g.28090A>T , LRG_219:g.28090A>T
NG_008397.1:g.104440T>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000411819.2:c.3382A>T (MSH6) ENSP00000406248.2:p.Ile1128Leu
ENST00000420813.6:c.3382A>T (MSH6) ENSP00000390382.2:p.Ile1128Leu
ENST00000455383.6:c.3382A>T (MSH6) ENSP00000397484.2:p.Ile1128Leu
ENST00000700004.2:c.3295A>T (MSH6) ENSP00000514752.2:p.Ile1099Leu
ENST00000699999.1:n.4353A>T (MSH6)
ENST00000700000.1:c.2113A>T (MSH6) ENSP00000514749.1:p.Ile705Leu
ENST00000700002.1:c.3685A>T (MSH6) ENSP00000514750.1:p.Ile1229Leu
ENST00000700003.1:c.1134A>T (MSH6) ENSP00000514751.1:n.1134A>T
ENST00000700004.1:c.2452A>T (MSH6) ENSP00000514752.1:p.Ile818Leu
ENST00000700005.1:n.2530A>T (MSH6)
ENST00000700006.1:n.4837A>T (MSH6)
ENST00000700007.1:n.2274A>T (MSH6)
ENST00000700008.1:n.1848A>T (MSH6)
ENST00000700009.1:n.2343A>T (MSH6)
ENST00000700010.1:n.1088A>T (MSH6)
ENST00000700011.1:n.2973A>T (MSH6)
ENST00000682451.1:n.4512T>A (FBXO11)
ENST00000684712.1:n.4774T>A (FBXO11)
ENST00000234420.11:c.3679A>T (MSH6) MANE Select ENSP00000234420.5:p.Ile1227Leu
ENST00000540021.6:c.3289A>T (MSH6) ENSP00000446475.1:p.Ile1097Leu
ENST00000652107.1:c.3382A>T (MSH6) ENSP00000498629.1:p.Ile1128Leu
ENST00000673637.1:c.3382A>T (MSH6) ENSP00000501310.1:p.Ile1128Leu
ENST00000234420.9:c.3679A>T (MSH6) ENSP00000234420.4:p.Ile1227Leu
ENST00000405808.5:c.169+1959T>A (FBXO11) ENSP00000385127.1:n.169+1959T>A
ENST00000434234.5:c.*124+1758T>A (FBXO11) ENSP00000402692.1:n.*124+1758T>A
ENST00000445503.5:c.*3026A>T (MSH6) ENSP00000405294.1:n.*3026A>T
ENST00000538136.1:c.2773A>T (MSH6) ENSP00000438580.1:p.Ile925Leu
ENST00000540021.5:c.3289A>T (MSH6) ENSP00000446475.1:p.Ile1097Leu
ENST00000614496.4:c.2773A>T (MSH6) ENSP00000477844.1:p.Ile925Leu
ENST00000622629.4:c.583A>T (MSH6) ENSP00000482078.1:p.Ile195Leu
NM_000179.2:c.3679A>T , LRG_219t1:c.3679A>T (MSH6) NP_000170.1:p.Ile1227Leu
NM_001281492.1:c.3289A>T (MSH6) NP_001268421.1:p.Ile1097Leu
NM_001281493.1:c.2773A>T (MSH6) NP_001268422.1:p.Ile925Leu
NM_001281494.1:c.2773A>T (MSH6) NP_001268423.1:p.Ile925Leu
XM_005264271.1:c.3382A>T (MSH6) XP_005264328.1:p.Ile1128Leu
XM_011532798.1:c.3496A>T (MSH6) XP_011531100.1:p.Ile1166Leu
XM_011532799.1:c.3382A>T (MSH6) XP_011531101.1:p.Ile1128Leu
XM_011532800.1:c.3382A>T (MSH6) XP_011531102.1:p.Ile1128Leu
XM_024452819.1:c.3679A>T (MSH6) XP_024308587.1:p.Ile1227Leu
XM_024452820.1:c.3496A>T (MSH6) XP_024308588.1:p.Ile1166Leu
XM_024452821.1:c.3382A>T (MSH6) XP_024308589.1:p.Ile1128Leu
XM_024452822.1:c.2773A>T (MSH6) XP_024308590.1:p.Ile925Leu
NM_000179.3:c.3679A>T (MSH6) MANE Select NP_000170.1:p.Ile1227Leu
NM_001281492.2:c.3289A>T (MSH6) NP_001268421.1:p.Ile1097Leu
NM_001281493.2:c.2773A>T (MSH6) NP_001268422.1:p.Ile925Leu
NM_001281494.2:c.2773A>T (MSH6) NP_001268423.1:p.Ile925Leu