Canonical Allele Identifier: CA013247
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 127801
dbSNP Id: rs587780063
gnomAD v2: 7-6031676-C-T
gnomAD v3: 7-5992045-C-T
gnomAD v4: 7-5992045-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5992045C>T , CM000669.2:g.5992045C>T GRCh38
NC_000007.13:g.6031676C>T , CM000669.1:g.6031676C>T GRCh37
NC_000007.12:g.5998202C>T NCBI36
NG_008466.1:g.22062G>A , LRG_161:g.22062G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*312G>A ENSP00000514615.2:n.*312G>A
ENST00000699840.2:c.913G>A ENSP00000514638.2:p.Val305Met
ENST00000699930.2:c.808G>A ENSP00000514695.2:p.Val270Met
ENST00000406569.8:c.916G>A ENSP00000514464.1:p.Val306Met
ENST00000644110.2:c.*510G>A ENSP00000496392.2:n.*510G>A
ENST00000699752.1:c.916G>A ENSP00000514561.1:p.Val306Met
ENST00000699753.1:c.*215G>A ENSP00000514562.1:n.*215G>A
ENST00000699754.1:c.718G>A ENSP00000514563.1:p.Val240Met
ENST00000699755.1:c.*315G>A ENSP00000514564.1:n.*315G>A
ENST00000699756.1:c.*503G>A ENSP00000514565.1:n.*503G>A
ENST00000699757.1:c.*173G>A ENSP00000514566.1:n.*173G>A
ENST00000699758.1:c.*173G>A ENSP00000514567.1:n.*173G>A
ENST00000699759.1:n.1770G>A
ENST00000699760.1:c.598G>A ENSP00000514568.1:p.Val200Met
ENST00000699761.1:c.511G>A ENSP00000514569.1:p.Val171Met
ENST00000699762.1:c.343G>A ENSP00000514570.1:p.Val115Met
ENST00000699763.1:c.511G>A ENSP00000514571.1:p.Val171Met
ENST00000699764.1:c.916G>A ENSP00000514572.1:p.Val306Met
ENST00000699765.1:c.*12G>A ENSP00000514573.1:n.*12G>A
ENST00000699766.1:c.916G>A ENSP00000514574.1:p.Val306Met
ENST00000699767.1:c.916G>A ENSP00000514575.1:p.Val306Met
ENST00000699768.1:c.916G>A ENSP00000514576.1:p.Val306Met
ENST00000699811.1:c.511G>A ENSP00000514614.1:p.Val171Met
ENST00000699813.1:n.1029G>A
ENST00000699814.1:c.539G>A
ENST00000699815.1:c.*408G>A ENSP00000514616.1:n.*408G>A
ENST00000699816.1:c.511G>A ENSP00000514617.1:p.Val171Met
ENST00000699817.1:c.*510G>A ENSP00000514618.1:n.*510G>A
ENST00000699818.1:c.511G>A ENSP00000514619.1:p.Val171Met
ENST00000699819.1:c.*73G>A ENSP00000514620.1:n.*73G>A
ENST00000699820.1:c.916G>A ENSP00000514621.1:p.Val306Met
ENST00000699821.1:c.511G>A ENSP00000514622.1:p.Val171Met
ENST00000699822.1:c.*368G>A ENSP00000514623.1:n.*368G>A
ENST00000699823.1:c.511G>A ENSP00000514624.1:p.Val171Met
ENST00000699824.1:c.*419G>A ENSP00000514625.1:n.*419G>A
ENST00000699825.1:c.511G>A ENSP00000514626.1:p.Val171Met
ENST00000699826.1:c.*315G>A ENSP00000514627.1:n.*315G>A
ENST00000699827.1:c.748G>A ENSP00000514628.1:p.Val250Met
ENST00000699828.1:c.916G>A ENSP00000514629.1:p.Val306Met
ENST00000699829.1:c.*417G>A ENSP00000514630.1:n.*417G>A
ENST00000699830.1:c.*315G>A ENSP00000514631.1:n.*315G>A
ENST00000699833.1:n.2688G>A
ENST00000699837.1:c.511G>A ENSP00000514635.1:p.Val171Met
ENST00000699838.1:c.*816G>A ENSP00000514636.1:n.*816G>A
ENST00000699839.1:c.1102G>A ENSP00000514637.1:p.Val368Met
ENST00000699840.1:c.913G>A ENSP00000514638.1:p.Val305Met
ENST00000699916.1:c.*173G>A ENSP00000514684.1:n.*173G>A
ENST00000699917.1:c.*365G>A ENSP00000514685.1:n.*365G>A
ENST00000699918.1:c.*417G>A ENSP00000514686.1:n.*417G>A
ENST00000699919.1:c.*503G>A ENSP00000514687.1:n.*503G>A
ENST00000699920.1:c.*552G>A ENSP00000514688.1:n.*552G>A
ENST00000699928.1:c.916G>A ENSP00000514693.1:p.Val306Met
ENST00000699929.1:c.*217G>A ENSP00000514694.1:n.*217G>A
ENST00000699930.1:c.808G>A ENSP00000514695.1:p.Val270Met
ENST00000699931.1:n.2344G>A
ENST00000699932.1:c.*12G>A ENSP00000514696.1:n.*12G>A
ENST00000699933.1:n.896G>A
ENST00000699951.1:c.*12G>A ENSP00000514706.1:n.*12G>A
ENST00000699952.1:c.803+5281G>A ENSP00000514707.1:n.803+5281G>A
ENST00000699953.1:c.*23G>A ENSP00000514708.1:n.*23G>A
ENST00000699954.1:c.*217G>A ENSP00000514709.1:n.*217G>A
ENST00000265849.12:c.916G>A MANE Select ENSP00000265849.7:p.Val306Met
ENST00000642292.1:c.511G>A ENSP00000495524.1:p.Val171Met
ENST00000642456.1:c.511G>A ENSP00000493814.1:p.Val171Met
ENST00000643595.1:c.*315G>A ENSP00000494497.1:n.*315G>A
ENST00000644110.1:c.598G>A ENSP00000496392.1:p.Val200Met
ENST00000265849.11:c.916G>A ENSP00000265849.7:p.Val306Met
ENST00000382321.5:c.803+5281G>A ENSP00000371758.4:n.803+5281G>A
ENST00000406569.7:n.916G>A
ENST00000441476.6:c.598G>A ENSP00000392843.2:p.Val200Met
ENST00000469652.1:n.63-9140G>A
NM_000535.5:c.916G>A , LRG_161t1:c.916G>A NP_000526.1:p.Val306Met
NR_003085.2:n.998G>A
XM_006715742.2:c.910G>A XP_006715805.1:p.Val304Met
XM_006715744.2:c.-18G>A XP_006715807.1:n.-18G>A
XM_011515427.1:c.961G>A XP_011513729.1:p.Val321Met
XM_011515428.1:c.961G>A XP_011513730.1:p.Val321Met
XM_011515429.1:c.598G>A XP_011513731.1:p.Val200Met
XM_011515430.1:c.598G>A XP_011513732.1:p.Val200Met
NM_000535.6:c.916G>A NP_000526.2:p.Val306Met
NM_001322003.1:c.511G>A NP_001308932.1:p.Val171Met
NM_001322004.1:c.511G>A NP_001308933.1:p.Val171Met
NM_001322005.1:c.511G>A NP_001308934.1:p.Val171Met
NM_001322006.1:c.916G>A NP_001308935.1:p.Val306Met
NM_001322007.1:c.598G>A NP_001308936.1:p.Val200Met
NM_001322008.1:c.598G>A NP_001308937.1:p.Val200Met
NM_001322009.1:c.511G>A NP_001308938.1:p.Val171Met
NM_001322010.1:c.511G>A NP_001308939.1:p.Val171Met
NM_001322011.1:c.-18G>A NP_001308940.1:n.-18G>A
NM_001322012.1:c.-18G>A NP_001308941.1:n.-18G>A
NM_001322013.1:c.343G>A NP_001308942.1:p.Val115Met
NM_001322014.1:c.916G>A NP_001308943.1:p.Val306Met
NM_001322015.1:c.607G>A NP_001308944.1:p.Val203Met
NR_136154.1:n.1003G>A
XM_006715744.4:c.-18G>A XP_006715807.1:n.-18G>A
XM_017012342.2:c.-18G>A XP_016867831.1:n.-18G>A
XM_024446800.1:c.511G>A XP_024302568.1:p.Val171Met
NM_000535.7:c.916G>A MANE Select NP_000526.2:p.Val306Met
NM_001322003.2:c.511G>A NP_001308932.1:p.Val171Met
NM_001322004.2:c.511G>A NP_001308933.1:p.Val171Met
NM_001322005.2:c.511G>A NP_001308934.1:p.Val171Met
NM_001322006.2:c.916G>A NP_001308935.1:p.Val306Met
NM_001322008.2:c.598G>A NP_001308937.1:p.Val200Met
NM_001322009.2:c.511G>A NP_001308938.1:p.Val171Met
NM_001322010.2:c.511G>A NP_001308939.1:p.Val171Met
NM_001322011.2:c.-18G>A NP_001308940.1:n.-18G>A
NM_001322012.2:c.-18G>A NP_001308941.1:n.-18G>A
NM_001322013.2:c.343G>A NP_001308942.1:p.Val115Met
NM_001322014.2:c.916G>A NP_001308943.1:p.Val306Met
NM_001322015.2:c.607G>A NP_001308944.1:p.Val203Met
NM_001322007.2:c.598G>A NP_001308936.1:p.Val200Met