Canonical Allele Identifier: CA011441
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 9237
dbSNP Id: rs63751466
gnomAD v2: 7-6017260-G-A
gnomAD v3: 7-5977629-G-A
gnomAD v4: 7-5977629-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5977629G>A , CM000669.2:g.5977629G>A GRCh38
NC_000007.13:g.6017260G>A , CM000669.1:g.6017260G>A GRCh37
NC_000007.12:g.5983786G>A NCBI36
NG_008466.1:g.36478C>T , LRG_161:g.36478C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1800C>T ENSP00000514615.2:n.*1800C>T
ENST00000699840.2:c.2401C>T ENSP00000514638.2:p.Arg801Ter
ENST00000699930.2:c.2296C>T ENSP00000514695.2:p.Arg766Ter
ENST00000406569.8:c.1764C>T ENSP00000514464.1:n.1764C>T
ENST00000644110.2:c.*1998C>T ENSP00000496392.2:n.*1998C>T
ENST00000699752.1:c.2248C>T ENSP00000514561.1:p.Arg750Ter
ENST00000699753.1:c.*1825C>T ENSP00000514562.1:n.*1825C>T
ENST00000699754.1:c.2206C>T ENSP00000514563.1:p.Arg736Ter
ENST00000699755.1:c.*1803C>T ENSP00000514564.1:n.*1803C>T
ENST00000699756.1:c.*1991C>T ENSP00000514565.1:n.*1991C>T
ENST00000699757.1:c.*1661C>T ENSP00000514566.1:n.*1661C>T
ENST00000699758.1:c.*1661C>T ENSP00000514567.1:n.*1661C>T
ENST00000699759.1:n.3258C>T
ENST00000699760.1:c.2086C>T ENSP00000514568.1:p.Arg696Ter
ENST00000699761.1:c.1999C>T ENSP00000514569.1:p.Arg667Ter
ENST00000699762.1:c.1831C>T ENSP00000514570.1:p.Arg611Ter
ENST00000699763.1:c.*1494C>T ENSP00000514571.1:n.*1494C>T
ENST00000699764.1:c.*722C>T ENSP00000514572.1:n.*722C>T
ENST00000699765.1:c.*1399C>T ENSP00000514573.1:n.*1399C>T
ENST00000699766.1:c.2437C>T ENSP00000514574.1:p.Arg813Ter
ENST00000699767.1:c.*45C>T ENSP00000514575.1:n.*45C>T
ENST00000699768.1:c.2260C>T ENSP00000514576.1:p.Arg754Ter
ENST00000699811.1:c.1999C>T ENSP00000514614.1:p.Arg667Ter
ENST00000699813.1:n.2517C>T
ENST00000699814.1:c.2027C>T
ENST00000699815.1:c.*1935C>T ENSP00000514616.1:n.*1935C>T
ENST00000699816.1:c.*1294C>T ENSP00000514617.1:n.*1294C>T
ENST00000699817.1:c.*1998C>T ENSP00000514618.1:n.*1998C>T
ENST00000699818.1:c.1999C>T ENSP00000514619.1:p.Arg667Ter
ENST00000699819.1:c.*1561C>T ENSP00000514620.1:n.*1561C>T
ENST00000699820.1:c.*342C>T ENSP00000514621.1:n.*342C>T
ENST00000699821.1:c.2032C>T ENSP00000514622.1:p.Arg678Ter
ENST00000699822.1:c.*1856C>T ENSP00000514623.1:n.*1856C>T
ENST00000699823.1:c.1999C>T ENSP00000514624.1:p.Arg667Ter
ENST00000699824.1:c.*1907C>T ENSP00000514625.1:n.*1907C>T
ENST00000699825.1:c.1843C>T ENSP00000514626.1:p.Arg615Ter
ENST00000699826.1:c.*1803C>T ENSP00000514627.1:n.*1803C>T
ENST00000699827.1:c.2236C>T ENSP00000514628.1:p.Arg746Ter
ENST00000699828.1:c.*1494C>T ENSP00000514629.1:n.*1494C>T
ENST00000699833.1:n.4176C>T
ENST00000699837.1:c.1999C>T ENSP00000514635.1:p.Arg667Ter
ENST00000699838.1:c.*2304C>T ENSP00000514636.1:n.*2304C>T
ENST00000699839.1:c.2590C>T ENSP00000514637.1:p.Arg864Ter
ENST00000699916.1:c.*1661C>T ENSP00000514684.1:n.*1661C>T
ENST00000699917.1:c.*1853C>T ENSP00000514685.1:n.*1853C>T
ENST00000699918.1:c.*1905C>T ENSP00000514686.1:n.*1905C>T
ENST00000699919.1:c.*1991C>T ENSP00000514687.1:n.*1991C>T
ENST00000699920.1:c.*2040C>T ENSP00000514688.1:n.*2040C>T
ENST00000699928.1:c.*342C>T ENSP00000514693.1:n.*342C>T
ENST00000699951.1:c.*1457C>T ENSP00000514706.1:n.*1457C>T
ENST00000699952.1:c.804-4087C>T ENSP00000514707.1:n.804-4087C>T
ENST00000265849.12:c.2404C>T MANE Select ENSP00000265849.7:p.Arg802Ter
ENST00000642292.1:c.1999C>T ENSP00000495524.1:p.Arg667Ter
ENST00000642456.1:c.1999C>T ENSP00000493814.1:p.Arg667Ter
ENST00000643595.1:c.*1803C>T ENSP00000494497.1:n.*1803C>T
ENST00000644110.1:c.2086C>T ENSP00000496392.1:p.Arg696Ter
ENST00000265849.11:c.2404C>T ENSP00000265849.7:p.Arg802Ter
ENST00000382321.5:c.1201C>T ENSP00000371758.4:p.Arg401Ter
ENST00000441476.6:c.2086C>T ENSP00000392843.2:p.Arg696Ter
NM_000535.5:c.2404C>T , LRG_161t1:c.2404C>T NP_000526.1:p.Arg802Ter
NR_003085.2:n.2486C>T
XM_006715742.2:c.2398C>T XP_006715805.1:p.Arg800Ter
XM_006715744.2:c.1471C>T XP_006715807.1:p.Arg491Ter
XM_011515427.1:c.2449C>T XP_011513729.1:p.Arg817Ter
XM_011515428.1:c.2293C>T XP_011513730.1:p.Arg765Ter
XM_011515429.1:c.2086C>T XP_011513731.1:p.Arg696Ter
XM_011515430.1:c.2086C>T XP_011513732.1:p.Arg696Ter
NM_000535.6:c.2404C>T NP_000526.2:p.Arg802Ter
NM_001322003.1:c.1999C>T NP_001308932.1:p.Arg667Ter
NM_001322004.1:c.1999C>T NP_001308933.1:p.Arg667Ter
NM_001322005.1:c.1999C>T NP_001308934.1:p.Arg667Ter
NM_001322006.1:c.2248C>T NP_001308935.1:p.Arg750Ter
NM_001322007.1:c.2086C>T NP_001308936.1:p.Arg696Ter
NM_001322008.1:c.2086C>T NP_001308937.1:p.Arg696Ter
NM_001322009.1:c.2032C>T NP_001308938.1:p.Arg678Ter
NM_001322010.1:c.1843C>T NP_001308939.1:p.Arg615Ter
NM_001322011.1:c.1471C>T NP_001308940.1:p.Arg491Ter
NM_001322012.1:c.1471C>T NP_001308941.1:p.Arg491Ter
NM_001322013.1:c.1831C>T NP_001308942.1:p.Arg611Ter
NM_001322014.1:c.2437C>T NP_001308943.1:p.Arg813Ter
NM_001322015.1:c.2095C>T NP_001308944.1:p.Arg699Ter
NR_136154.1:n.2448C>T
XM_006715744.4:c.1471C>T XP_006715807.1:p.Arg491Ter
XM_017012342.2:c.1471C>T XP_016867831.1:p.Arg491Ter
XM_024446800.1:c.1843C>T XP_024302568.1:p.Arg615Ter
NM_000535.7:c.2404C>T MANE Select NP_000526.2:p.Arg802Ter
NM_001322003.2:c.1999C>T NP_001308932.1:p.Arg667Ter
NM_001322004.2:c.1999C>T NP_001308933.1:p.Arg667Ter
NM_001322005.2:c.1999C>T NP_001308934.1:p.Arg667Ter
NM_001322006.2:c.2248C>T NP_001308935.1:p.Arg750Ter
NM_001322008.2:c.2086C>T NP_001308937.1:p.Arg696Ter
NM_001322009.2:c.2032C>T NP_001308938.1:p.Arg678Ter
NM_001322010.2:c.1843C>T NP_001308939.1:p.Arg615Ter
NM_001322011.2:c.1471C>T NP_001308940.1:p.Arg491Ter
NM_001322012.2:c.1471C>T NP_001308941.1:p.Arg491Ter
NM_001322013.2:c.1831C>T NP_001308942.1:p.Arg611Ter
NM_001322014.2:c.2437C>T NP_001308943.1:p.Arg813Ter
NM_001322015.2:c.2095C>T NP_001308944.1:p.Arg699Ter
NM_001322007.2:c.2086C>T NP_001308936.1:p.Arg696Ter