Canonical Allele Identifier: CA010587
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 184644
dbSNP Id: rs368928783
gnomAD v2: 7-6026416-G-A
gnomAD v3: 7-5986785-G-A
gnomAD v4: 7-5986785-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986785G>A , CM000669.2:g.5986785G>A GRCh38
NC_000007.13:g.6026416G>A , CM000669.1:g.6026416G>A GRCh37
NC_000007.12:g.5992942G>A NCBI36
NG_008466.1:g.27322C>T , LRG_161:g.27322C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1376C>T ENSP00000514615.2:n.*1376C>T
ENST00000699840.2:c.1977C>T ENSP00000514638.2:p.Ala659=
ENST00000699930.2:c.1872C>T ENSP00000514695.2:p.Ala624=
ENST00000406569.8:c.1678+302C>T ENSP00000514464.1:n.1678+302C>T
ENST00000644110.2:c.*1574C>T ENSP00000496392.2:n.*1574C>T
ENST00000699752.1:c.1824C>T ENSP00000514561.1:p.Ala608=
ENST00000699753.1:c.*1401C>T ENSP00000514562.1:n.*1401C>T
ENST00000699754.1:c.1782C>T ENSP00000514563.1:p.Ala594=
ENST00000699755.1:c.*1379C>T ENSP00000514564.1:n.*1379C>T
ENST00000699756.1:c.*1567C>T ENSP00000514565.1:n.*1567C>T
ENST00000699757.1:c.*1237C>T ENSP00000514566.1:n.*1237C>T
ENST00000699758.1:c.*1237C>T ENSP00000514567.1:n.*1237C>T
ENST00000699759.1:n.2834C>T
ENST00000699760.1:c.1662C>T ENSP00000514568.1:p.Ala554=
ENST00000699761.1:c.1575C>T ENSP00000514569.1:p.Ala525=
ENST00000699762.1:c.1407C>T ENSP00000514570.1:p.Ala469=
ENST00000699763.1:c.*1070C>T ENSP00000514571.1:n.*1070C>T
ENST00000699764.1:c.*298C>T ENSP00000514572.1:n.*298C>T
ENST00000699765.1:c.*1076C>T ENSP00000514573.1:n.*1076C>T
ENST00000699766.1:c.1980C>T ENSP00000514574.1:p.Ala660=
ENST00000699767.1:c.1980C>T ENSP00000514575.1:p.Ala660=
ENST00000699768.1:c.1980C>T ENSP00000514576.1:p.Ala660=
ENST00000699811.1:c.1575C>T ENSP00000514614.1:p.Ala525=
ENST00000699813.1:n.2093C>T
ENST00000699814.1:c.1603C>T
ENST00000699815.1:c.*1511C>T ENSP00000514616.1:n.*1511C>T
ENST00000699816.1:c.*870C>T ENSP00000514617.1:n.*870C>T
ENST00000699817.1:c.*1574C>T ENSP00000514618.1:n.*1574C>T
ENST00000699818.1:c.1575C>T ENSP00000514619.1:p.Ala525=
ENST00000699819.1:c.*1137C>T ENSP00000514620.1:n.*1137C>T
ENST00000699820.1:c.1144+3015C>T ENSP00000514621.1:n.1144+3015C>T
ENST00000699821.1:c.1575C>T ENSP00000514622.1:p.Ala525=
ENST00000699822.1:c.*1432C>T ENSP00000514623.1:n.*1432C>T
ENST00000699823.1:c.1575C>T ENSP00000514624.1:p.Ala525=
ENST00000699824.1:c.*1483C>T ENSP00000514625.1:n.*1483C>T
ENST00000699825.1:c.1419C>T ENSP00000514626.1:p.Ala473=
ENST00000699826.1:c.*1379C>T ENSP00000514627.1:n.*1379C>T
ENST00000699827.1:c.1812C>T ENSP00000514628.1:p.Ala604=
ENST00000699828.1:c.*1070C>T ENSP00000514629.1:n.*1070C>T
ENST00000699833.1:n.3752C>T
ENST00000699837.1:c.1575C>T ENSP00000514635.1:p.Ala525=
ENST00000699838.1:c.*1880C>T ENSP00000514636.1:n.*1880C>T
ENST00000699839.1:c.2166C>T ENSP00000514637.1:p.Ala722=
ENST00000699916.1:c.*1237C>T ENSP00000514684.1:n.*1237C>T
ENST00000699917.1:c.*1429C>T ENSP00000514685.1:n.*1429C>T
ENST00000699918.1:c.*1481C>T ENSP00000514686.1:n.*1481C>T
ENST00000699919.1:c.*1567C>T ENSP00000514687.1:n.*1567C>T
ENST00000699920.1:c.*1616C>T ENSP00000514688.1:n.*1616C>T
ENST00000699928.1:c.989-3794C>T ENSP00000514693.1:n.989-3794C>T
ENST00000699951.1:c.*1076C>T ENSP00000514706.1:n.*1076C>T
ENST00000699952.1:c.803+10541C>T ENSP00000514707.1:n.803+10541C>T
ENST00000265849.12:c.1980C>T MANE Select ENSP00000265849.7:p.Ala660=
ENST00000642292.1:c.1575C>T ENSP00000495524.1:p.Ala525=
ENST00000642456.1:c.1575C>T ENSP00000493814.1:p.Ala525=
ENST00000643595.1:c.*1379C>T ENSP00000494497.1:n.*1379C>T
ENST00000644110.1:c.1662C>T ENSP00000496392.1:p.Ala554=
ENST00000265849.11:c.1980C>T ENSP00000265849.7:p.Ala660=
ENST00000382321.5:c.804-3794C>T ENSP00000371758.4:n.804-3794C>T
ENST00000406569.7:n.1678+302C>T
ENST00000441476.6:c.1662C>T ENSP00000392843.2:p.Ala554=
ENST00000469652.1:n.63-3880C>T
NM_000535.5:c.1980C>T , LRG_161t1:c.1980C>T NP_000526.1:p.Ala660=
NR_003085.2:n.2062C>T
XM_006715742.2:c.1974C>T XP_006715805.1:p.Ala658=
XM_006715744.2:c.1047C>T XP_006715807.1:p.Ala349=
XM_011515427.1:c.2025C>T XP_011513729.1:p.Ala675=
XM_011515428.1:c.1869C>T XP_011513730.1:p.Ala623=
XM_011515429.1:c.1662C>T XP_011513731.1:p.Ala554=
XM_011515430.1:c.1662C>T XP_011513732.1:p.Ala554=
NM_000535.6:c.1980C>T NP_000526.2:p.Ala660=
NM_001322003.1:c.1575C>T NP_001308932.1:p.Ala525=
NM_001322004.1:c.1575C>T NP_001308933.1:p.Ala525=
NM_001322005.1:c.1575C>T NP_001308934.1:p.Ala525=
NM_001322006.1:c.1824C>T NP_001308935.1:p.Ala608=
NM_001322007.1:c.1662C>T NP_001308936.1:p.Ala554=
NM_001322008.1:c.1662C>T NP_001308937.1:p.Ala554=
NM_001322009.1:c.1575C>T NP_001308938.1:p.Ala525=
NM_001322010.1:c.1419C>T NP_001308939.1:p.Ala473=
NM_001322011.1:c.1047C>T NP_001308940.1:p.Ala349=
NM_001322012.1:c.1047C>T NP_001308941.1:p.Ala349=
NM_001322013.1:c.1407C>T NP_001308942.1:p.Ala469=
NM_001322014.1:c.1980C>T NP_001308943.1:p.Ala660=
NM_001322015.1:c.1671C>T NP_001308944.1:p.Ala557=
NR_136154.1:n.2067C>T
XM_006715744.4:c.1047C>T XP_006715807.1:p.Ala349=
XM_017012342.2:c.1047C>T XP_016867831.1:p.Ala349=
XM_024446800.1:c.1419C>T XP_024302568.1:p.Ala473=
NM_000535.7:c.1980C>T MANE Select NP_000526.2:p.Ala660=
NM_001322003.2:c.1575C>T NP_001308932.1:p.Ala525=
NM_001322004.2:c.1575C>T NP_001308933.1:p.Ala525=
NM_001322005.2:c.1575C>T NP_001308934.1:p.Ala525=
NM_001322006.2:c.1824C>T NP_001308935.1:p.Ala608=
NM_001322008.2:c.1662C>T NP_001308937.1:p.Ala554=
NM_001322009.2:c.1575C>T NP_001308938.1:p.Ala525=
NM_001322010.2:c.1419C>T NP_001308939.1:p.Ala473=
NM_001322011.2:c.1047C>T NP_001308940.1:p.Ala349=
NM_001322012.2:c.1047C>T NP_001308941.1:p.Ala349=
NM_001322013.2:c.1407C>T NP_001308942.1:p.Ala469=
NM_001322014.2:c.1980C>T NP_001308943.1:p.Ala660=
NM_001322015.2:c.1671C>T NP_001308944.1:p.Ala557=
NM_001322007.2:c.1662C>T NP_001308936.1:p.Ala554=