Canonical Allele Identifier: CA010377
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 186596
dbSNP Id: rs786203073
gnomAD v2: 7-6026521-TA-T
gnomAD v4: 7-5986890-TA-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986893del , CM000669.2:g.5986893del GRCh38
NC_000007.13:g.6026524del , CM000669.1:g.6026524del GRCh37
NC_000007.12:g.5993050del NCBI36
NG_008466.1:g.27216del , LRG_161:g.27216del

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1270del ENSP00000514615.2:n.*1270del
ENST00000699840.2:c.1871del ENSP00000514638.2:p.Leu624Ter
ENST00000699930.2:c.1766del ENSP00000514695.2:p.Leu589Ter
ENST00000406569.8:c.1678+196del ENSP00000514464.1:n.1678+196del
ENST00000644110.2:c.*1468del ENSP00000496392.2:n.*1468del
ENST00000699752.1:c.1718del ENSP00000514561.1:p.Leu573Ter
ENST00000699753.1:c.*1295del ENSP00000514562.1:n.*1295del
ENST00000699754.1:c.1676del ENSP00000514563.1:p.Leu559Ter
ENST00000699755.1:c.*1273del ENSP00000514564.1:n.*1273del
ENST00000699756.1:c.*1461del ENSP00000514565.1:n.*1461del
ENST00000699757.1:c.*1131del ENSP00000514566.1:n.*1131del
ENST00000699758.1:c.*1131del ENSP00000514567.1:n.*1131del
ENST00000699759.1:n.2728del
ENST00000699760.1:c.1556del ENSP00000514568.1:p.Leu519Ter
ENST00000699761.1:c.1469del ENSP00000514569.1:p.Leu490Ter
ENST00000699762.1:c.1301del ENSP00000514570.1:p.Leu434Ter
ENST00000699763.1:c.*964del ENSP00000514571.1:n.*964del
ENST00000699764.1:c.*192del ENSP00000514572.1:n.*192del
ENST00000699765.1:c.*970del ENSP00000514573.1:n.*970del
ENST00000699766.1:c.1874del ENSP00000514574.1:p.Leu625Ter
ENST00000699767.1:c.1874del ENSP00000514575.1:p.Leu625Ter
ENST00000699768.1:c.1874del ENSP00000514576.1:p.Leu625Ter
ENST00000699811.1:c.1469del ENSP00000514614.1:p.Leu490Ter
ENST00000699813.1:n.1987del
ENST00000699814.1:c.1497del
ENST00000699815.1:c.*1405del ENSP00000514616.1:n.*1405del
ENST00000699816.1:c.*764del ENSP00000514617.1:n.*764del
ENST00000699817.1:c.*1468del ENSP00000514618.1:n.*1468del
ENST00000699818.1:c.1469del ENSP00000514619.1:p.Leu490Ter
ENST00000699819.1:c.*1031del ENSP00000514620.1:n.*1031del
ENST00000699820.1:c.1144+2909del ENSP00000514621.1:n.1144+2909del
ENST00000699821.1:c.1469del ENSP00000514622.1:p.Leu490Ter
ENST00000699822.1:c.*1326del ENSP00000514623.1:n.*1326del
ENST00000699823.1:c.1469del ENSP00000514624.1:p.Leu490Ter
ENST00000699824.1:c.*1377del ENSP00000514625.1:n.*1377del
ENST00000699825.1:c.1313del ENSP00000514626.1:p.Leu438Ter
ENST00000699826.1:c.*1273del ENSP00000514627.1:n.*1273del
ENST00000699827.1:c.1706del ENSP00000514628.1:p.Leu569Ter
ENST00000699828.1:c.*964del ENSP00000514629.1:n.*964del
ENST00000699833.1:n.3646del
ENST00000699837.1:c.1469del ENSP00000514635.1:p.Leu490Ter
ENST00000699838.1:c.*1774del ENSP00000514636.1:n.*1774del
ENST00000699839.1:c.2060del ENSP00000514637.1:p.Leu687Ter
ENST00000699916.1:c.*1131del ENSP00000514684.1:n.*1131del
ENST00000699917.1:c.*1323del ENSP00000514685.1:n.*1323del
ENST00000699918.1:c.*1375del ENSP00000514686.1:n.*1375del
ENST00000699919.1:c.*1461del ENSP00000514687.1:n.*1461del
ENST00000699920.1:c.*1510del ENSP00000514688.1:n.*1510del
ENST00000699928.1:c.989-3900del ENSP00000514693.1:n.989-3900del
ENST00000699951.1:c.*970del ENSP00000514706.1:n.*970del
ENST00000699952.1:c.803+10435del ENSP00000514707.1:n.803+10435del
ENST00000265849.12:c.1874del MANE Select ENSP00000265849.7:p.Leu625Ter
ENST00000642292.1:c.1469del ENSP00000495524.1:p.Leu490Ter
ENST00000642456.1:c.1469del ENSP00000493814.1:p.Leu490Ter
ENST00000643595.1:c.*1273del ENSP00000494497.1:n.*1273del
ENST00000644110.1:c.1556del ENSP00000496392.1:p.Leu519Ter
ENST00000265849.11:c.1874del ENSP00000265849.7:p.Leu625Ter
ENST00000382321.5:c.804-3900del ENSP00000371758.4:n.804-3900del
ENST00000406569.7:n.1678+196del
ENST00000441476.6:c.1556del ENSP00000392843.2:p.Leu519Ter
ENST00000469652.1:n.63-3986del
NM_000535.5:c.1874del , LRG_161t1:c.1874del NP_000526.1:p.Leu625Ter
NR_003085.2:n.1956del
XM_006715742.2:c.1868del XP_006715805.1:p.Leu623Ter
XM_006715744.2:c.941del XP_006715807.1:p.Leu314Ter
XM_011515427.1:c.1919del XP_011513729.1:p.Leu640Ter
XM_011515428.1:c.1763del XP_011513730.1:p.Leu588Ter
XM_011515429.1:c.1556del XP_011513731.1:p.Leu519Ter
XM_011515430.1:c.1556del XP_011513732.1:p.Leu519Ter
NM_000535.6:c.1874del NP_000526.2:p.Leu625Ter
NM_001322003.1:c.1469del NP_001308932.1:p.Leu490Ter
NM_001322004.1:c.1469del NP_001308933.1:p.Leu490Ter
NM_001322005.1:c.1469del NP_001308934.1:p.Leu490Ter
NM_001322006.1:c.1718del NP_001308935.1:p.Leu573Ter
NM_001322007.1:c.1556del NP_001308936.1:p.Leu519Ter
NM_001322008.1:c.1556del NP_001308937.1:p.Leu519Ter
NM_001322009.1:c.1469del NP_001308938.1:p.Leu490Ter
NM_001322010.1:c.1313del NP_001308939.1:p.Leu438Ter
NM_001322011.1:c.941del NP_001308940.1:p.Leu314Ter
NM_001322012.1:c.941del NP_001308941.1:p.Leu314Ter
NM_001322013.1:c.1301del NP_001308942.1:p.Leu434Ter
NM_001322014.1:c.1874del NP_001308943.1:p.Leu625Ter
NM_001322015.1:c.1565del NP_001308944.1:p.Leu522Ter
NR_136154.1:n.1961del
XM_006715744.4:c.941del XP_006715807.1:p.Leu314Ter
XM_017012342.2:c.941del XP_016867831.1:p.Leu314Ter
XM_024446800.1:c.1313del XP_024302568.1:p.Leu438Ter
NM_000535.7:c.1874del MANE Select NP_000526.2:p.Leu625Ter
NM_001322003.2:c.1469del NP_001308932.1:p.Leu490Ter
NM_001322004.2:c.1469del NP_001308933.1:p.Leu490Ter
NM_001322005.2:c.1469del NP_001308934.1:p.Leu490Ter
NM_001322006.2:c.1718del NP_001308935.1:p.Leu573Ter
NM_001322008.2:c.1556del NP_001308937.1:p.Leu519Ter
NM_001322009.2:c.1469del NP_001308938.1:p.Leu490Ter
NM_001322010.2:c.1313del NP_001308939.1:p.Leu438Ter
NM_001322011.2:c.941del NP_001308940.1:p.Leu314Ter
NM_001322012.2:c.941del NP_001308941.1:p.Leu314Ter
NM_001322013.2:c.1301del NP_001308942.1:p.Leu434Ter
NM_001322014.2:c.1874del NP_001308943.1:p.Leu625Ter
NM_001322015.2:c.1565del NP_001308944.1:p.Leu522Ter
NM_001322007.2:c.1556del NP_001308936.1:p.Leu519Ter