Canonical Allele Identifier: CA010049

Gene: MLH1

Linked Data

• ClinVar Variation Id: 90192
• ClinVar RCV Id: RCV000075680 ; RCV001215653 ; RCV002354258 ; RCV003451140
• dbSNP Id: rs267607742
• MyVariant Identifiers: chr3:g.37045967T>A (hg19) ; chr3:g.37004476T>A (hg38)
• PubMed: PMID:12655568 ; PMID:18618713 ; PMID:18772310

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.37004476T>A , CM000665.2:g.37004476T>A	GRCh38
NC_000003.11:g.37045967T>A , CM000665.1:g.37045967T>A	GRCh37
NC_000003.10:g.37020971T>A	NCBI36
NG_007109.2:g.16127T>A , LRG_216:g.16127T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.380+2T>A	ENSP00000416476.2:n.380+2T>A
ENST00000429117.6:c.86+2T>A	ENSP00000407019.2:n.86+2T>A
ENST00000450420.6:c.380+2T>A	ENSP00000393006.2:n.380+2T>A
ENST00000456676.7:c.380+2T>A	ENSP00000416687.3:n.380+2T>A
ENST00000458009.6:c.380+2T>A	ENSP00000411066.2:n.380+2T>A
ENST00000492474.6:c.-344+2T>A	ENSP00000518393.1:n.-344+2T>A
ENST00000616768.6:c.380+2T>A	ENSP00000480669.3:n.380+2T>A
ENST00000673673.2:c.380+2T>A	ENSP00000500979.2:n.380+2T>A
ENST00000231790.8:c.380+2T>A MANE Select	ENSP00000231790.3:n.380+2T>A
ENST00000413212.2:c.-344+2T>A	ENSP00000400844.2:n.-344+2T>A
ENST00000432299.6:c.*460+2T>A	ENSP00000416783.1:n.*460+2T>A
ENST00000441265.6:c.-344+2T>A	ENSP00000398392.2:n.-344+2T>A
ENST00000442249.6:n.395+2T>A
ENST00000447829.6:c.18-2515T>A	ENSP00000399329.2:n.18-2515T>A
ENST00000539477.6:c.-252+2T>A	ENSP00000443665.1:n.-252+2T>A
ENST00000673673.1:c.333+2T>A
ENST00000673713.1:n.411+2T>A
ENST00000673715.1:c.380+2T>A	ENSP00000501301.1:n.380+2T>A
ENST00000673897.1:c.*172+2T>A	ENSP00000501109.1:n.*172+2T>A
ENST00000673899.1:c.380+2T>A	ENSP00000501030.1:n.380+2T>A
ENST00000673947.1:c.*520+2T>A	ENSP00000501304.1:n.*520+2T>A
ENST00000673972.1:c.*258+2T>A	ENSP00000501281.1:n.*258+2T>A
ENST00000673990.1:n.365+2T>A
ENST00000674019.1:c.-344+2T>A	ENSP00000501081.1:n.-344+2T>A
ENST00000674107.1:n.322+2T>A
ENST00000674111.1:c.380+2T>A	ENSP00000501162.1:n.380+2T>A
ENST00000231790.6:c.380+2T>A	ENSP00000231790.2:n.380+2T>A
ENST00000429117.5:c.86+2T>A	ENSP00000407019.1:n.86+2T>A
ENST00000432299.5:c.*460+2T>A	ENSP00000416783.1:n.*460+2T>A
ENST00000435176.5:c.86+2T>A	ENSP00000402564.1:n.86+2T>A
ENST00000441265.5:c.-252+2T>A	ENSP00000398392.1:n.-252+2T>A
ENST00000442249.5:c.*172+2T>A	ENSP00000387511.1:n.*172+2T>A
ENST00000454028.5:c.*253+2T>A	ENSP00000392649.1:n.*253+2T>A
ENST00000455445.6:c.-344+2T>A	ENSP00000398272.2:n.-344+2T>A
ENST00000456676.6:c.355+2T>A
ENST00000457004.5:c.*159+2T>A	ENSP00000407773.1:n.*159+2T>A
ENST00000458205.6:c.-344+2T>A	ENSP00000402667.2:n.-344+2T>A
ENST00000466900.5:n.307+2T>A
ENST00000485889.1:n.384+2T>A
ENST00000492474.5:n.403+2T>A
ENST00000536378.5:c.-344+2T>A	ENSP00000444286.2:n.-344+2T>A
ENST00000539477.5:c.-252+2T>A	ENSP00000443665.1:n.-252+2T>A
NM_000249.3:c.380+2T>A , LRG_216t1:c.380+2T>A	NP_000240.1:n.380+2T>A
NM_001167617.1:c.86+2T>A	NP_001161089.1:n.86+2T>A
NM_001167618.1:c.-344+2T>A	NP_001161090.1:n.-344+2T>A
NM_001167619.1:c.-252+2T>A	NP_001161091.1:n.-252+2T>A
NM_001258271.1:c.380+2T>A	NP_001245200.1:n.380+2T>A
NM_001258273.1:c.-344+2T>A	NP_001245202.1:n.-344+2T>A
NM_001258274.1:c.-344+2T>A	NP_001245203.1:n.-344+2T>A
XM_005265161.1:c.380+2T>A	XP_005265218.1:n.380+2T>A
XM_005265163.1:c.-344+2T>A	XP_005265220.1:n.-344+2T>A
XM_005265164.1:c.-344+2T>A	XP_005265221.1:n.-344+2T>A
XM_005265166.1:c.-550+2T>A	XP_005265223.1:n.-550+2T>A
XM_011533727.1:c.-447+2T>A	XP_011532029.1:n.-447+2T>A
NM_001167617.2:c.86+2T>A	NP_001161089.1:n.86+2T>A
NM_001167618.2:c.-344+2T>A	NP_001161090.1:n.-344+2T>A
NM_001167619.2:c.-252+2T>A	NP_001161091.1:n.-252+2T>A
NM_001258274.2:c.-344+2T>A	NP_001245203.1:n.-344+2T>A
NM_001354615.1:c.-252+2T>A	NP_001341544.1:n.-252+2T>A
NM_001354616.1:c.-252+2T>A	NP_001341545.1:n.-252+2T>A
NM_001354617.1:c.-344+2T>A	NP_001341546.1:n.-344+2T>A
NM_001354618.1:c.-344+2T>A	NP_001341547.1:n.-344+2T>A
NM_001354619.1:c.-344+2T>A	NP_001341548.1:n.-344+2T>A
NM_001354620.1:c.86+2T>A	NP_001341549.1:n.86+2T>A
NM_001354621.1:c.-437+2T>A	NP_001341550.1:n.-437+2T>A
NM_001354622.1:c.-550+2T>A	NP_001341551.1:n.-550+2T>A
NM_001354623.1:c.-550+2T>A	NP_001341552.1:n.-550+2T>A
NM_001354624.1:c.-447+2T>A	NP_001341553.1:n.-447+2T>A
NM_001354625.1:c.-355+2T>A	NP_001341554.1:n.-355+2T>A
NM_001354626.1:c.-447+2T>A	NP_001341555.1:n.-447+2T>A
NM_001354627.1:c.-447+2T>A	NP_001341556.1:n.-447+2T>A
NM_001354628.1:c.380+2T>A	NP_001341557.1:n.380+2T>A
NM_001354629.1:c.281+2T>A	NP_001341558.1:n.281+2T>A
NM_001354630.1:c.380+2T>A	NP_001341559.1:n.380+2T>A
XM_005265161.2:c.380+2T>A	XP_005265218.1:n.380+2T>A
XM_017006450.2:c.-437+2T>A	XP_016861939.1:n.-437+2T>A
NM_000249.4:c.380+2T>A MANE Select	NP_000240.1:n.380+2T>A
NM_001167617.3:c.86+2T>A	NP_001161089.1:n.86+2T>A
NM_001167618.3:c.-344+2T>A	NP_001161090.1:n.-344+2T>A
NM_001167619.3:c.-252+2T>A	NP_001161091.1:n.-252+2T>A
NM_001258271.2:c.380+2T>A	NP_001245200.1:n.380+2T>A
NM_001258273.2:c.-344+2T>A	NP_001245202.1:n.-344+2T>A
NM_001258274.3:c.-344+2T>A	NP_001245203.1:n.-344+2T>A
NM_001354615.2:c.-252+2T>A	NP_001341544.1:n.-252+2T>A
NM_001354616.2:c.-252+2T>A	NP_001341545.1:n.-252+2T>A
NM_001354617.2:c.-344+2T>A	NP_001341546.1:n.-344+2T>A
NM_001354618.2:c.-344+2T>A	NP_001341547.1:n.-344+2T>A
NM_001354619.2:c.-344+2T>A	NP_001341548.1:n.-344+2T>A
NM_001354620.2:c.86+2T>A	NP_001341549.1:n.86+2T>A
NM_001354621.2:c.-437+2T>A	NP_001341550.1:n.-437+2T>A
NM_001354622.2:c.-550+2T>A	NP_001341551.1:n.-550+2T>A
NM_001354623.2:c.-550+2T>A	NP_001341552.1:n.-550+2T>A
NM_001354624.2:c.-447+2T>A	NP_001341553.1:n.-447+2T>A
NM_001354625.2:c.-355+2T>A	NP_001341554.1:n.-355+2T>A
NM_001354626.2:c.-447+2T>A	NP_001341555.1:n.-447+2T>A
NM_001354627.2:c.-447+2T>A	NP_001341556.1:n.-447+2T>A
NM_001354628.2:c.380+2T>A	NP_001341557.1:n.380+2T>A
NM_001354629.2:c.281+2T>A	NP_001341558.1:n.281+2T>A
NM_001354630.2:c.380+2T>A	NP_001341559.1:n.380+2T>A