Canonical Allele Identifier: CA009618
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 186045
dbSNP Id: rs141084758
gnomAD v2: 7-6027002-T-C
gnomAD v3: 7-5987371-T-C
gnomAD v4: 7-5987371-T-C

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987371T>C , CM000669.2:g.5987371T>C GRCh38
NC_000007.13:g.6027002T>C , CM000669.1:g.6027002T>C GRCh37
NC_000007.12:g.5993528T>C NCBI36
NG_008466.1:g.26736A>G , LRG_161:g.26736A>G

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*790A>G ENSP00000514615.2:n.*790A>G
ENST00000699840.2:c.1391A>G ENSP00000514638.2:p.Lys464Arg
ENST00000699930.2:c.1286A>G ENSP00000514695.2:p.Lys429Arg
ENST00000406569.8:c.1394A>G ENSP00000514464.1:p.Lys465Arg
ENST00000644110.2:c.*988A>G ENSP00000496392.2:n.*988A>G
ENST00000699752.1:c.1238A>G ENSP00000514561.1:p.Lys413Arg
ENST00000699753.1:c.*815A>G ENSP00000514562.1:n.*815A>G
ENST00000699754.1:c.1196A>G ENSP00000514563.1:p.Lys399Arg
ENST00000699755.1:c.*793A>G ENSP00000514564.1:n.*793A>G
ENST00000699756.1:c.*981A>G ENSP00000514565.1:n.*981A>G
ENST00000699757.1:c.*651A>G ENSP00000514566.1:n.*651A>G
ENST00000699758.1:c.*651A>G ENSP00000514567.1:n.*651A>G
ENST00000699759.1:n.2248A>G
ENST00000699760.1:c.1076A>G ENSP00000514568.1:p.Lys359Arg
ENST00000699761.1:c.989A>G ENSP00000514569.1:p.Lys330Arg
ENST00000699762.1:c.821A>G ENSP00000514570.1:p.Lys274Arg
ENST00000699763.1:c.*484A>G ENSP00000514571.1:n.*484A>G
ENST00000699764.1:c.1394A>G ENSP00000514572.1:p.Lys465Arg
ENST00000699765.1:c.*490A>G ENSP00000514573.1:n.*490A>G
ENST00000699766.1:c.1394A>G ENSP00000514574.1:p.Lys465Arg
ENST00000699767.1:c.1394A>G ENSP00000514575.1:p.Lys465Arg
ENST00000699768.1:c.1394A>G ENSP00000514576.1:p.Lys465Arg
ENST00000699811.1:c.989A>G ENSP00000514614.1:p.Lys330Arg
ENST00000699813.1:n.1507A>G
ENST00000699814.1:c.1017A>G
ENST00000699815.1:c.*925A>G ENSP00000514616.1:n.*925A>G
ENST00000699816.1:c.*284A>G ENSP00000514617.1:n.*284A>G
ENST00000699817.1:c.*988A>G ENSP00000514618.1:n.*988A>G
ENST00000699818.1:c.989A>G ENSP00000514619.1:p.Lys330Arg
ENST00000699819.1:c.*551A>G ENSP00000514620.1:n.*551A>G
ENST00000699820.1:c.1144+2429A>G ENSP00000514621.1:n.1144+2429A>G
ENST00000699821.1:c.989A>G ENSP00000514622.1:p.Lys330Arg
ENST00000699822.1:c.*846A>G ENSP00000514623.1:n.*846A>G
ENST00000699823.1:c.989A>G ENSP00000514624.1:p.Lys330Arg
ENST00000699824.1:c.*897A>G ENSP00000514625.1:n.*897A>G
ENST00000699825.1:c.833A>G ENSP00000514626.1:p.Lys278Arg
ENST00000699826.1:c.*793A>G ENSP00000514627.1:n.*793A>G
ENST00000699827.1:c.1226A>G ENSP00000514628.1:p.Lys409Arg
ENST00000699828.1:c.*484A>G ENSP00000514629.1:n.*484A>G
ENST00000699833.1:n.3166A>G
ENST00000699837.1:c.989A>G ENSP00000514635.1:p.Lys330Arg
ENST00000699838.1:c.*1294A>G ENSP00000514636.1:n.*1294A>G
ENST00000699839.1:c.1580A>G ENSP00000514637.1:p.Lys527Arg
ENST00000699916.1:c.*651A>G ENSP00000514684.1:n.*651A>G
ENST00000699917.1:c.*843A>G ENSP00000514685.1:n.*843A>G
ENST00000699918.1:c.*895A>G ENSP00000514686.1:n.*895A>G
ENST00000699919.1:c.*981A>G ENSP00000514687.1:n.*981A>G
ENST00000699920.1:c.*1030A>G ENSP00000514688.1:n.*1030A>G
ENST00000699928.1:c.989-4380A>G ENSP00000514693.1:n.989-4380A>G
ENST00000699929.1:c.*695A>G ENSP00000514694.1:n.*695A>G
ENST00000699930.1:c.1286A>G ENSP00000514695.1:p.Lys429Arg
ENST00000699931.1:n.2822A>G
ENST00000699951.1:c.*490A>G ENSP00000514706.1:n.*490A>G
ENST00000699952.1:c.803+9955A>G ENSP00000514707.1:n.803+9955A>G
ENST00000699953.1:c.*501A>G ENSP00000514708.1:n.*501A>G
ENST00000699954.1:c.*695A>G ENSP00000514709.1:n.*695A>G
ENST00000265849.12:c.1394A>G MANE Select ENSP00000265849.7:p.Lys465Arg
ENST00000642292.1:c.989A>G ENSP00000495524.1:p.Lys330Arg
ENST00000642456.1:c.989A>G ENSP00000493814.1:p.Lys330Arg
ENST00000643595.1:c.*793A>G ENSP00000494497.1:n.*793A>G
ENST00000644110.1:c.1076A>G ENSP00000496392.1:p.Lys359Arg
ENST00000265849.11:c.1394A>G ENSP00000265849.7:p.Lys465Arg
ENST00000382321.5:c.804-4380A>G ENSP00000371758.4:n.804-4380A>G
ENST00000406569.7:n.1394A>G
ENST00000441476.6:c.1076A>G ENSP00000392843.2:p.Lys359Arg
ENST00000469652.1:n.63-4466A>G
NM_000535.5:c.1394A>G , LRG_161t1:c.1394A>G NP_000526.1:p.Lys465Arg
NR_003085.2:n.1476A>G
XM_006715742.2:c.1388A>G XP_006715805.1:p.Lys463Arg
XM_006715744.2:c.461A>G XP_006715807.1:p.Lys154Arg
XM_011515427.1:c.1439A>G XP_011513729.1:p.Lys480Arg
XM_011515428.1:c.1283A>G XP_011513730.1:p.Lys428Arg
XM_011515429.1:c.1076A>G XP_011513731.1:p.Lys359Arg
XM_011515430.1:c.1076A>G XP_011513732.1:p.Lys359Arg
NM_000535.6:c.1394A>G NP_000526.2:p.Lys465Arg
NM_001322003.1:c.989A>G NP_001308932.1:p.Lys330Arg
NM_001322004.1:c.989A>G NP_001308933.1:p.Lys330Arg
NM_001322005.1:c.989A>G NP_001308934.1:p.Lys330Arg
NM_001322006.1:c.1238A>G NP_001308935.1:p.Lys413Arg
NM_001322007.1:c.1076A>G NP_001308936.1:p.Lys359Arg
NM_001322008.1:c.1076A>G NP_001308937.1:p.Lys359Arg
NM_001322009.1:c.989A>G NP_001308938.1:p.Lys330Arg
NM_001322010.1:c.833A>G NP_001308939.1:p.Lys278Arg
NM_001322011.1:c.461A>G NP_001308940.1:p.Lys154Arg
NM_001322012.1:c.461A>G NP_001308941.1:p.Lys154Arg
NM_001322013.1:c.821A>G NP_001308942.1:p.Lys274Arg
NM_001322014.1:c.1394A>G NP_001308943.1:p.Lys465Arg
NM_001322015.1:c.1085A>G NP_001308944.1:p.Lys362Arg
NR_136154.1:n.1481A>G
XM_006715744.4:c.461A>G XP_006715807.1:p.Lys154Arg
XM_017012342.2:c.461A>G XP_016867831.1:p.Lys154Arg
XM_024446800.1:c.833A>G XP_024302568.1:p.Lys278Arg
NM_000535.7:c.1394A>G MANE Select NP_000526.2:p.Lys465Arg
NM_001322003.2:c.989A>G NP_001308932.1:p.Lys330Arg
NM_001322004.2:c.989A>G NP_001308933.1:p.Lys330Arg
NM_001322005.2:c.989A>G NP_001308934.1:p.Lys330Arg
NM_001322006.2:c.1238A>G NP_001308935.1:p.Lys413Arg
NM_001322008.2:c.1076A>G NP_001308937.1:p.Lys359Arg
NM_001322009.2:c.989A>G NP_001308938.1:p.Lys330Arg
NM_001322010.2:c.833A>G NP_001308939.1:p.Lys278Arg
NM_001322011.2:c.461A>G NP_001308940.1:p.Lys154Arg
NM_001322012.2:c.461A>G NP_001308941.1:p.Lys154Arg
NM_001322013.2:c.821A>G NP_001308942.1:p.Lys274Arg
NM_001322014.2:c.1394A>G NP_001308943.1:p.Lys465Arg
NM_001322015.2:c.1085A>G NP_001308944.1:p.Lys362Arg
NM_001322007.2:c.1076A>G NP_001308936.1:p.Lys359Arg