Canonical Allele Identifier: CA009606

Gene: MLH1

Linked Data

• ClinVar Variation Id: 90136
• ClinVar RCV Id: RCV000075622 ; RCV002433578
• dbSNP Id: rs111052004
• MyVariant Identifiers: chr3:g.37035040T>G (hg19) ; chr3:g.36993549T>G (hg38)
• PubMed: PMID:9399661 ; PMID:9697702 ; PMID:10480359 ; PMID:15340264 ; PMID:16395668

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.36993549T>G , CM000665.2:g.36993549T>G	GRCh38
NC_000003.11:g.37035040T>G , CM000665.1:g.37035040T>G	GRCh37
NC_000003.10:g.37010044T>G	NCBI36
NG_007109.2:g.5200T>G , LRG_216:g.5200T>G
NG_008418.1:g.4756A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.2T>G	ENSP00000416476.2:p.Met1Arg
ENST00000450420.6:c.2T>G	ENSP00000393006.2:p.Met1Arg
ENST00000456676.7:c.2T>G	ENSP00000416687.3:p.Met1Arg
ENST00000458009.6:c.2T>G	ENSP00000411066.2:p.Met1Arg
ENST00000616768.6:c.2T>G	ENSP00000480669.3:p.Met1Arg
ENST00000673673.2:c.2T>G	ENSP00000500979.2:p.Met1Arg
ENST00000231790.8:c.2T>G MANE Select	ENSP00000231790.3:p.Met1Arg
ENST00000432299.6:c.2T>G	ENSP00000416783.1:p.Met1Arg
ENST00000442249.6:n.17T>G
ENST00000673713.1:n.33T>G
ENST00000673715.1:c.2T>G	ENSP00000501301.1:p.Met1Arg
ENST00000673897.1:c.2T>G	ENSP00000501109.1:p.Met1Arg
ENST00000673899.1:c.2T>G	ENSP00000501030.1:p.Met1Arg
ENST00000673947.1:c.2T>G	ENSP00000501304.1:p.Met1Arg
ENST00000673972.1:c.2T>G	ENSP00000501281.1:p.Met1Arg
ENST00000674111.1:c.2T>G	ENSP00000501162.1:p.Met1Arg
ENST00000231790.6:c.2T>G	ENSP00000231790.2:p.Met1Arg
ENST00000432299.5:c.2T>G	ENSP00000416783.1:p.Met1Arg
ENST00000442249.5:c.2T>G	ENSP00000387511.1:p.Met1Arg
ENST00000454028.5:c.2T>G	ENSP00000392649.1:p.Met1Arg
ENST00000457004.5:c.2T>G	ENSP00000407773.1:p.Met1Arg
ENST00000536378.5:c.-631T>G	ENSP00000444286.2:n.-631T>G
NM_000249.3:c.2T>G , LRG_216t1:c.2T>G	NP_000240.1:p.Met1Arg
NM_001258271.1:c.2T>G	NP_001245200.1:p.Met1Arg
NM_001258273.1:c.-631T>G	NP_001245202.1:n.-631T>G
XM_005265161.1:c.2T>G	XP_005265218.1:p.Met1Arg
XM_005265164.1:c.-717T>G	XP_005265221.1:n.-717T>G
NM_001167617.2:c.-515T>G	NP_001161089.1:n.-515T>G
NM_001167618.2:c.-944T>G	NP_001161090.1:n.-944T>G
NM_001167619.2:c.-857T>G	NP_001161091.1:n.-857T>G
NM_001258274.2:c.-1094T>G	NP_001245203.1:n.-1094T>G
NM_001354615.1:c.-625T>G	NP_001341544.1:n.-625T>G
NM_001354616.1:c.-625T>G	NP_001341545.1:n.-625T>G
NM_001354617.1:c.-717T>G	NP_001341546.1:n.-717T>G
NM_001354618.1:c.-949T>G	NP_001341547.1:n.-949T>G
NM_001354619.1:c.-1073T>G	NP_001341548.1:n.-1073T>G
NM_001354620.1:c.-283T>G	NP_001341549.1:n.-283T>G
NM_001354621.1:c.-1042T>G	NP_001341550.1:n.-1042T>G
NM_001354622.1:c.-1155T>G	NP_001341551.1:n.-1155T>G
NM_001354623.1:c.-1064T>G	NP_001341552.1:n.-1064T>G
NM_001354624.1:c.-825T>G	NP_001341553.1:n.-825T>G
NM_001354625.1:c.-723T>G	NP_001341554.1:n.-723T>G
NM_001354626.1:c.-820T>G	NP_001341555.1:n.-820T>G
NM_001354627.1:c.-1052T>G	NP_001341556.1:n.-1052T>G
NM_001354628.1:c.2T>G	NP_001341557.1:p.Met1Arg
NM_001354629.1:c.2T>G	NP_001341558.1:p.Met1Arg
NM_001354630.1:c.2T>G	NP_001341559.1:p.Met1Arg
XM_005265161.2:c.2T>G	XP_005265218.1:p.Met1Arg
XM_017006450.2:c.-810T>G	XP_016861939.1:n.-810T>G
NM_000249.4:c.2T>G MANE Select	NP_000240.1:p.Met1Arg
NM_001167617.3:c.-515T>G	NP_001161089.1:n.-515T>G
NM_001167618.3:c.-944T>G	NP_001161090.1:n.-944T>G
NM_001167619.3:c.-857T>G	NP_001161091.1:n.-857T>G
NM_001258271.2:c.2T>G	NP_001245200.1:p.Met1Arg
NM_001258273.2:c.-631T>G	NP_001245202.1:n.-631T>G
NM_001258274.3:c.-1094T>G	NP_001245203.1:n.-1094T>G
NM_001354615.2:c.-625T>G	NP_001341544.1:n.-625T>G
NM_001354616.2:c.-625T>G	NP_001341545.1:n.-625T>G
NM_001354617.2:c.-717T>G	NP_001341546.1:n.-717T>G
NM_001354618.2:c.-949T>G	NP_001341547.1:n.-949T>G
NM_001354619.2:c.-1073T>G	NP_001341548.1:n.-1073T>G
NM_001354620.2:c.-283T>G	NP_001341549.1:n.-283T>G
NM_001354621.2:c.-1042T>G	NP_001341550.1:n.-1042T>G
NM_001354622.2:c.-1155T>G	NP_001341551.1:n.-1155T>G
NM_001354623.2:c.-1064T>G	NP_001341552.1:n.-1064T>G
NM_001354624.2:c.-825T>G	NP_001341553.1:n.-825T>G
NM_001354625.2:c.-723T>G	NP_001341554.1:n.-723T>G
NM_001354626.2:c.-820T>G	NP_001341555.1:n.-820T>G
NM_001354627.2:c.-1052T>G	NP_001341556.1:n.-1052T>G
NM_001354628.2:c.2T>G	NP_001341557.1:p.Met1Arg
NM_001354629.2:c.2T>G	NP_001341558.1:p.Met1Arg
NM_001354630.2:c.2T>G	NP_001341559.1:p.Met1Arg