Canonical Allele Identifier: CA009586
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 142257
dbSNP Id: rs150201462
gnomAD v2: 7-6027017-C-T
gnomAD v3: 7-5987386-C-T
gnomAD v4: 7-5987386-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987386C>T , CM000669.2:g.5987386C>T GRCh38
NC_000007.13:g.6027017C>T , CM000669.1:g.6027017C>T GRCh37
NC_000007.12:g.5993543C>T NCBI36
NG_008466.1:g.26721G>A , LRG_161:g.26721G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*775G>A ENSP00000514615.2:n.*775G>A
ENST00000699840.2:c.1376G>A ENSP00000514638.2:p.Gly459Asp
ENST00000699930.2:c.1271G>A ENSP00000514695.2:p.Gly424Asp
ENST00000406569.8:c.1379G>A ENSP00000514464.1:p.Gly460Asp
ENST00000644110.2:c.*973G>A ENSP00000496392.2:n.*973G>A
ENST00000699752.1:c.1223G>A ENSP00000514561.1:p.Gly408Asp
ENST00000699753.1:c.*800G>A ENSP00000514562.1:n.*800G>A
ENST00000699754.1:c.1181G>A ENSP00000514563.1:p.Gly394Asp
ENST00000699755.1:c.*778G>A ENSP00000514564.1:n.*778G>A
ENST00000699756.1:c.*966G>A ENSP00000514565.1:n.*966G>A
ENST00000699757.1:c.*636G>A ENSP00000514566.1:n.*636G>A
ENST00000699758.1:c.*636G>A ENSP00000514567.1:n.*636G>A
ENST00000699759.1:n.2233G>A
ENST00000699760.1:c.1061G>A ENSP00000514568.1:p.Gly354Asp
ENST00000699761.1:c.974G>A ENSP00000514569.1:p.Gly325Asp
ENST00000699762.1:c.806G>A ENSP00000514570.1:p.Gly269Asp
ENST00000699763.1:c.*469G>A ENSP00000514571.1:n.*469G>A
ENST00000699764.1:c.1379G>A ENSP00000514572.1:p.Gly460Asp
ENST00000699765.1:c.*475G>A ENSP00000514573.1:n.*475G>A
ENST00000699766.1:c.1379G>A ENSP00000514574.1:p.Gly460Asp
ENST00000699767.1:c.1379G>A ENSP00000514575.1:p.Gly460Asp
ENST00000699768.1:c.1379G>A ENSP00000514576.1:p.Gly460Asp
ENST00000699811.1:c.974G>A ENSP00000514614.1:p.Gly325Asp
ENST00000699813.1:n.1492G>A
ENST00000699814.1:c.1002G>A
ENST00000699815.1:c.*910G>A ENSP00000514616.1:n.*910G>A
ENST00000699816.1:c.*269G>A ENSP00000514617.1:n.*269G>A
ENST00000699817.1:c.*973G>A ENSP00000514618.1:n.*973G>A
ENST00000699818.1:c.974G>A ENSP00000514619.1:p.Gly325Asp
ENST00000699819.1:c.*536G>A ENSP00000514620.1:n.*536G>A
ENST00000699820.1:c.1144+2414G>A ENSP00000514621.1:n.1144+2414G>A
ENST00000699821.1:c.974G>A ENSP00000514622.1:p.Gly325Asp
ENST00000699822.1:c.*831G>A ENSP00000514623.1:n.*831G>A
ENST00000699823.1:c.974G>A ENSP00000514624.1:p.Gly325Asp
ENST00000699824.1:c.*882G>A ENSP00000514625.1:n.*882G>A
ENST00000699825.1:c.818G>A ENSP00000514626.1:p.Gly273Asp
ENST00000699826.1:c.*778G>A ENSP00000514627.1:n.*778G>A
ENST00000699827.1:c.1211G>A ENSP00000514628.1:p.Gly404Asp
ENST00000699828.1:c.*469G>A ENSP00000514629.1:n.*469G>A
ENST00000699833.1:n.3151G>A
ENST00000699837.1:c.974G>A ENSP00000514635.1:p.Gly325Asp
ENST00000699838.1:c.*1279G>A ENSP00000514636.1:n.*1279G>A
ENST00000699839.1:c.1565G>A ENSP00000514637.1:p.Gly522Asp
ENST00000699916.1:c.*636G>A ENSP00000514684.1:n.*636G>A
ENST00000699917.1:c.*828G>A ENSP00000514685.1:n.*828G>A
ENST00000699918.1:c.*880G>A ENSP00000514686.1:n.*880G>A
ENST00000699919.1:c.*966G>A ENSP00000514687.1:n.*966G>A
ENST00000699920.1:c.*1015G>A ENSP00000514688.1:n.*1015G>A
ENST00000699928.1:c.989-4395G>A ENSP00000514693.1:n.989-4395G>A
ENST00000699929.1:c.*680G>A ENSP00000514694.1:n.*680G>A
ENST00000699930.1:c.1271G>A ENSP00000514695.1:p.Gly424Asp
ENST00000699931.1:n.2807G>A
ENST00000699951.1:c.*475G>A ENSP00000514706.1:n.*475G>A
ENST00000699952.1:c.803+9940G>A ENSP00000514707.1:n.803+9940G>A
ENST00000699953.1:c.*486G>A ENSP00000514708.1:n.*486G>A
ENST00000699954.1:c.*680G>A ENSP00000514709.1:n.*680G>A
ENST00000265849.12:c.1379G>A MANE Select ENSP00000265849.7:p.Gly460Asp
ENST00000642292.1:c.974G>A ENSP00000495524.1:p.Gly325Asp
ENST00000642456.1:c.974G>A ENSP00000493814.1:p.Gly325Asp
ENST00000643595.1:c.*778G>A ENSP00000494497.1:n.*778G>A
ENST00000644110.1:c.1061G>A ENSP00000496392.1:p.Gly354Asp
ENST00000265849.11:c.1379G>A ENSP00000265849.7:p.Gly460Asp
ENST00000382321.5:c.804-4395G>A ENSP00000371758.4:n.804-4395G>A
ENST00000406569.7:n.1379G>A
ENST00000441476.6:c.1061G>A ENSP00000392843.2:p.Gly354Asp
ENST00000469652.1:n.63-4481G>A
NM_000535.5:c.1379G>A , LRG_161t1:c.1379G>A NP_000526.1:p.Gly460Asp
NR_003085.2:n.1461G>A
XM_006715742.2:c.1373G>A XP_006715805.1:p.Gly458Asp
XM_006715744.2:c.446G>A XP_006715807.1:p.Gly149Asp
XM_011515427.1:c.1424G>A XP_011513729.1:p.Gly475Asp
XM_011515428.1:c.1268G>A XP_011513730.1:p.Gly423Asp
XM_011515429.1:c.1061G>A XP_011513731.1:p.Gly354Asp
XM_011515430.1:c.1061G>A XP_011513732.1:p.Gly354Asp
NM_000535.6:c.1379G>A NP_000526.2:p.Gly460Asp
NM_001322003.1:c.974G>A NP_001308932.1:p.Gly325Asp
NM_001322004.1:c.974G>A NP_001308933.1:p.Gly325Asp
NM_001322005.1:c.974G>A NP_001308934.1:p.Gly325Asp
NM_001322006.1:c.1223G>A NP_001308935.1:p.Gly408Asp
NM_001322007.1:c.1061G>A NP_001308936.1:p.Gly354Asp
NM_001322008.1:c.1061G>A NP_001308937.1:p.Gly354Asp
NM_001322009.1:c.974G>A NP_001308938.1:p.Gly325Asp
NM_001322010.1:c.818G>A NP_001308939.1:p.Gly273Asp
NM_001322011.1:c.446G>A NP_001308940.1:p.Gly149Asp
NM_001322012.1:c.446G>A NP_001308941.1:p.Gly149Asp
NM_001322013.1:c.806G>A NP_001308942.1:p.Gly269Asp
NM_001322014.1:c.1379G>A NP_001308943.1:p.Gly460Asp
NM_001322015.1:c.1070G>A NP_001308944.1:p.Gly357Asp
NR_136154.1:n.1466G>A
XM_006715744.4:c.446G>A XP_006715807.1:p.Gly149Asp
XM_017012342.2:c.446G>A XP_016867831.1:p.Gly149Asp
XM_024446800.1:c.818G>A XP_024302568.1:p.Gly273Asp
NM_000535.7:c.1379G>A MANE Select NP_000526.2:p.Gly460Asp
NM_001322003.2:c.974G>A NP_001308932.1:p.Gly325Asp
NM_001322004.2:c.974G>A NP_001308933.1:p.Gly325Asp
NM_001322005.2:c.974G>A NP_001308934.1:p.Gly325Asp
NM_001322006.2:c.1223G>A NP_001308935.1:p.Gly408Asp
NM_001322008.2:c.1061G>A NP_001308937.1:p.Gly354Asp
NM_001322009.2:c.974G>A NP_001308938.1:p.Gly325Asp
NM_001322010.2:c.818G>A NP_001308939.1:p.Gly273Asp
NM_001322011.2:c.446G>A NP_001308940.1:p.Gly149Asp
NM_001322012.2:c.446G>A NP_001308941.1:p.Gly149Asp
NM_001322013.2:c.806G>A NP_001308942.1:p.Gly269Asp
NM_001322014.2:c.1379G>A NP_001308943.1:p.Gly460Asp
NM_001322015.2:c.1070G>A NP_001308944.1:p.Gly357Asp
NM_001322007.2:c.1061G>A NP_001308936.1:p.Gly354Asp