Canonical Allele Identifier: CA009342

Gene: MLH1

Linked Data

• ClinVar Variation Id: 90113
• ClinVar RCV Id: RCV000075599
• dbSNP Id: rs63750052
• MyVariant Identifiers: chr3:g.37042469_37042470del (hg19) ; chr3:g.37000978_37000979del (hg38)
• PubMed: PMID:12919140

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.37000978_37000979del , CM000665.2:g.37000978_37000979del	GRCh38
NC_000003.11:g.37042469_37042470del , CM000665.1:g.37042469_37042470del	GRCh37
NC_000003.10:g.37017473_37017474del	NCBI36
NG_007109.2:g.12629_12630del , LRG_216:g.12629_12630del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.231_232del	ENSP00000416476.2:p.Cys77Ter
ENST00000429117.6:c.-59_-58del	ENSP00000407019.2:n.-59_-58del
ENST00000450420.6:c.231_232del	ENSP00000393006.2:p.Cys77Ter
ENST00000456676.7:c.231_232del	ENSP00000416687.3:p.Cys77Ter
ENST00000458009.6:c.231_232del	ENSP00000411066.2:p.Cys77Ter
ENST00000492474.6:c.-493_-492del	ENSP00000518393.1:n.-493_-492del
ENST00000616768.6:c.231_232del	ENSP00000480669.3:p.Cys77Ter
ENST00000673673.2:c.231_232del	ENSP00000500979.2:p.Cys77Ter
ENST00000231790.8:c.231_232del MANE Select	ENSP00000231790.3:p.Cys77Ter
ENST00000413212.2:c.-493_-492del	ENSP00000400844.2:n.-493_-492del
ENST00000432299.6:c.*311_*312del	ENSP00000416783.1:n.*311_*312del
ENST00000441265.6:c.-493_-492del	ENSP00000398392.2:n.-493_-492del
ENST00000442249.6:n.246_247del
ENST00000447829.6:c.-59_-58del	ENSP00000399329.2:n.-59_-58del
ENST00000539477.6:c.-401_-400del	ENSP00000443665.1:n.-401_-400del
ENST00000673673.1:c.184_185del
ENST00000673713.1:n.262_263del
ENST00000673715.1:c.231_232del	ENSP00000501301.1:p.Cys77Ter
ENST00000673897.1:c.*23_*24del	ENSP00000501109.1:n.*23_*24del
ENST00000673899.1:c.231_232del	ENSP00000501030.1:p.Cys77Ter
ENST00000673947.1:c.*371_*372del	ENSP00000501304.1:n.*371_*372del
ENST00000673972.1:c.*109_*110del	ENSP00000501281.1:n.*109_*110del
ENST00000673990.1:n.216_217del
ENST00000674019.1:c.-493_-492del	ENSP00000501081.1:n.-493_-492del
ENST00000674107.1:n.173_174del
ENST00000674111.1:c.231_232del	ENSP00000501162.1:p.Cys77Ter
ENST00000231790.6:c.231_232del	ENSP00000231790.2:p.Cys77Ter
ENST00000429117.5:c.-59_-58del	ENSP00000407019.1:n.-59_-58del
ENST00000432299.5:c.*311_*312del	ENSP00000416783.1:n.*311_*312del
ENST00000435176.5:c.-59_-58del	ENSP00000402564.1:n.-59_-58del
ENST00000441265.5:c.-401_-400del	ENSP00000398392.1:n.-401_-400del
ENST00000442249.5:c.*23_*24del	ENSP00000387511.1:n.*23_*24del
ENST00000454028.5:c.*109_*110del	ENSP00000392649.1:n.*109_*110del
ENST00000455445.6:c.-493_-492del	ENSP00000398272.2:n.-493_-492del
ENST00000456676.6:c.206_207del
ENST00000457004.5:c.*86-3423_*86-3422del	ENSP00000407773.1:n.*86-3423_*86-3422del
ENST00000458205.6:c.-493_-492del	ENSP00000402667.2:n.-493_-492del
ENST00000466900.5:n.158_159del
ENST00000476172.5:n.353_354del
ENST00000485889.1:n.235_236del
ENST00000492474.5:n.254_255del
ENST00000536378.5:c.-493_-492del	ENSP00000444286.2:n.-493_-492del
ENST00000539477.5:c.-401_-400del	ENSP00000443665.1:n.-401_-400del
NM_000249.3:c.231_232del , LRG_216t1:c.231_232del	NP_000240.1:p.Cys77Ter
NM_001167617.1:c.-59_-58del	NP_001161089.1:n.-59_-58del
NM_001167618.1:c.-493_-492del	NP_001161090.1:n.-493_-492del
NM_001167619.1:c.-401_-400del	NP_001161091.1:n.-401_-400del
NM_001258271.1:c.231_232del	NP_001245200.1:p.Cys77Ter
NM_001258273.1:c.-493_-492del	NP_001245202.1:n.-493_-492del
NM_001258274.1:c.-493_-492del	NP_001245203.1:n.-493_-492del
XM_005265161.1:c.231_232del	XP_005265218.1:p.Cys77Ter
XM_005265163.1:c.-493_-492del	XP_005265220.1:n.-493_-492del
XM_005265164.1:c.-493_-492del	XP_005265221.1:n.-493_-492del
XM_005265166.1:c.-699_-698del	XP_005265223.1:n.-699_-698del
XM_011533727.1:c.-596_-595del	XP_011532029.1:n.-596_-595del
NM_001167617.2:c.-59_-58del	NP_001161089.1:n.-59_-58del
NM_001167618.2:c.-493_-492del	NP_001161090.1:n.-493_-492del
NM_001167619.2:c.-401_-400del	NP_001161091.1:n.-401_-400del
NM_001258274.2:c.-493_-492del	NP_001245203.1:n.-493_-492del
NM_001354615.1:c.-396_-395del	NP_001341544.1:n.-396_-395del
NM_001354616.1:c.-401_-400del	NP_001341545.1:n.-401_-400del
NM_001354617.1:c.-493_-492del	NP_001341546.1:n.-493_-492del
NM_001354618.1:c.-493_-492del	NP_001341547.1:n.-493_-492del
NM_001354619.1:c.-493_-492del	NP_001341548.1:n.-493_-492del
NM_001354620.1:c.-59_-58del	NP_001341549.1:n.-59_-58del
NM_001354621.1:c.-586_-585del	NP_001341550.1:n.-586_-585del
NM_001354622.1:c.-699_-698del	NP_001341551.1:n.-699_-698del
NM_001354623.1:c.-699_-698del	NP_001341552.1:n.-699_-698del
NM_001354624.1:c.-596_-595del	NP_001341553.1:n.-596_-595del
NM_001354625.1:c.-499_-498del	NP_001341554.1:n.-499_-498del
NM_001354626.1:c.-596_-595del	NP_001341555.1:n.-596_-595del
NM_001354627.1:c.-596_-595del	NP_001341556.1:n.-596_-595del
NM_001354628.1:c.231_232del	NP_001341557.1:p.Cys77Ter
NM_001354629.1:c.208-3423_208-3422del	NP_001341558.1:n.208-3423_208-3422del
NM_001354630.1:c.231_232del	NP_001341559.1:p.Cys77Ter
XM_005265161.2:c.231_232del	XP_005265218.1:p.Cys77Ter
XM_017006450.2:c.-586_-585del	XP_016861939.1:n.-586_-585del
NM_000249.4:c.231_232del MANE Select	NP_000240.1:p.Cys77Ter
NM_001167617.3:c.-59_-58del	NP_001161089.1:n.-59_-58del
NM_001167618.3:c.-493_-492del	NP_001161090.1:n.-493_-492del
NM_001167619.3:c.-401_-400del	NP_001161091.1:n.-401_-400del
NM_001258271.2:c.231_232del	NP_001245200.1:p.Cys77Ter
NM_001258273.2:c.-493_-492del	NP_001245202.1:n.-493_-492del
NM_001258274.3:c.-493_-492del	NP_001245203.1:n.-493_-492del
NM_001354615.2:c.-396_-395del	NP_001341544.1:n.-396_-395del
NM_001354616.2:c.-401_-400del	NP_001341545.1:n.-401_-400del
NM_001354617.2:c.-493_-492del	NP_001341546.1:n.-493_-492del
NM_001354618.2:c.-493_-492del	NP_001341547.1:n.-493_-492del
NM_001354619.2:c.-493_-492del	NP_001341548.1:n.-493_-492del
NM_001354620.2:c.-59_-58del	NP_001341549.1:n.-59_-58del
NM_001354621.2:c.-586_-585del	NP_001341550.1:n.-586_-585del
NM_001354622.2:c.-699_-698del	NP_001341551.1:n.-699_-698del
NM_001354623.2:c.-699_-698del	NP_001341552.1:n.-699_-698del
NM_001354624.2:c.-596_-595del	NP_001341553.1:n.-596_-595del
NM_001354625.2:c.-499_-498del	NP_001341554.1:n.-499_-498del
NM_001354626.2:c.-596_-595del	NP_001341555.1:n.-596_-595del
NM_001354627.2:c.-596_-595del	NP_001341556.1:n.-596_-595del
NM_001354628.2:c.231_232del	NP_001341557.1:p.Cys77Ter
NM_001354629.2:c.208-3423_208-3422del	NP_001341558.1:n.208-3423_208-3422del
NM_001354630.2:c.231_232del	NP_001341559.1:p.Cys77Ter