Canonical Allele Identifier: CA009121

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 89220
• ClinVar RCV Id: RCV000074683 ; RCV000219463 ; RCV000491054 ; RCV000791380
• dbSNP Id: rs587779220
• MyVariant Identifiers: chr2:g.48026876T>C (hg19) ; chr2:g.47799737T>C (hg38)
• PubMed: PMID:17531815 ; PMID:22581703 ; PMID:23621914 ; PMID:25617771

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799737T>C , CM000664.2:g.47799737T>C	GRCh38
NC_000002.11:g.48026876T>C , CM000664.1:g.48026876T>C	GRCh37
NC_000002.10:g.47880380T>C	NCBI36
NG_007111.1:g.21591T>C , LRG_219:g.21591T>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.1457T>C (MSH6)	ENSP00000406248.2:p.Leu486Pro
ENST00000420813.6:c.1457T>C (MSH6)	ENSP00000390382.2:p.Leu486Pro
ENST00000455383.6:c.1457T>C (MSH6)	ENSP00000397484.2:p.Leu486Pro
ENST00000700004.2:c.1754T>C (MSH6)	ENSP00000514752.2:p.Leu585Pro
ENST00000699999.1:n.1838T>C (MSH6)
ENST00000700000.1:c.1606+148T>C (MSH6)	ENSP00000514749.1:n.1606+148T>C
ENST00000700002.1:c.1760T>C (MSH6)	ENSP00000514750.1:p.Leu587Pro
ENST00000700003.1:c.627+3674T>C (MSH6)	ENSP00000514751.1:n.627+3674T>C
ENST00000700004.1:c.911T>C (MSH6)	ENSP00000514752.1:p.Leu304Pro
ENST00000234420.11:c.1754T>C (MSH6) MANE Select	ENSP00000234420.5:p.Leu585Pro
ENST00000540021.6:c.1364T>C (MSH6)	ENSP00000446475.1:p.Leu455Pro
ENST00000652107.1:c.1457T>C (MSH6)	ENSP00000498629.1:p.Leu486Pro
ENST00000673637.1:c.1457T>C (MSH6)	ENSP00000501310.1:p.Leu486Pro
ENST00000234420.9:c.1754T>C (MSH6)	ENSP00000234420.4:p.Leu585Pro
ENST00000405808.5:c.169+8458A>G (FBXO11)	ENSP00000385127.1:n.169+8458A>G
ENST00000434234.5:c.*124+8257A>G (FBXO11)	ENSP00000402692.1:n.*124+8257A>G
ENST00000445503.5:c.*1101T>C (MSH6)	ENSP00000405294.1:n.*1101T>C
ENST00000538136.1:c.848T>C (MSH6)	ENSP00000438580.1:p.Leu283Pro
ENST00000540021.5:c.1364T>C (MSH6)	ENSP00000446475.1:p.Leu455Pro
ENST00000614496.4:c.848T>C (MSH6)	ENSP00000477844.1:p.Leu283Pro
ENST00000616033.4:c.1751T>C (MSH6)	ENSP00000480261.1:p.Leu584Pro
ENST00000622629.4:c.-1343T>C (MSH6)	ENSP00000482078.1:n.-1343T>C
NM_000179.2:c.1754T>C , LRG_219t1:c.1754T>C (MSH6)	NP_000170.1:p.Leu585Pro
NM_001281492.1:c.1364T>C (MSH6)	NP_001268421.1:p.Leu455Pro
NM_001281493.1:c.848T>C (MSH6)	NP_001268422.1:p.Leu283Pro
NM_001281494.1:c.848T>C (MSH6)	NP_001268423.1:p.Leu283Pro
XM_005264271.1:c.1457T>C (MSH6)	XP_005264328.1:p.Leu486Pro
XM_011532798.1:c.1571T>C (MSH6)	XP_011531100.1:p.Leu524Pro
XM_011532799.1:c.1457T>C (MSH6)	XP_011531101.1:p.Leu486Pro
XM_011532800.1:c.1457T>C (MSH6)	XP_011531102.1:p.Leu486Pro
XM_024452819.1:c.1754T>C (MSH6)	XP_024308587.1:p.Leu585Pro
XM_024452820.1:c.1571T>C (MSH6)	XP_024308588.1:p.Leu524Pro
XM_024452821.1:c.1457T>C (MSH6)	XP_024308589.1:p.Leu486Pro
XM_024452822.1:c.848T>C (MSH6)	XP_024308590.1:p.Leu283Pro
NM_000179.3:c.1754T>C (MSH6) MANE Select	NP_000170.1:p.Leu585Pro
NM_001281492.2:c.1364T>C (MSH6)	NP_001268421.1:p.Leu455Pro
NM_001281493.2:c.848T>C (MSH6)	NP_001268422.1:p.Leu283Pro
NM_001281494.2:c.848T>C (MSH6)	NP_001268423.1:p.Leu283Pro