Canonical Allele Identifier: CA009015

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 182623
• ClinVar RCV Id: RCV000160668 ; RCV000560061 ; RCV000571101 ; RCV000708869 ; RCV000767214
• dbSNP Id: rs730881791
• ExAC: 2:48026783 G / A
• gnomAD v2: 2-48026783-G-A
• gnomAD v3: 2-47799644-G-A
• gnomAD v4: 2-47799644-G-A
• MyVariant Identifiers: chr2:g.48026783G>A (hg19) ; chr2:g.47799644G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799644G>A , CM000664.2:g.47799644G>A	GRCh38
NC_000002.11:g.48026783G>A , CM000664.1:g.48026783G>A	GRCh37
NC_000002.10:g.47880287G>A	NCBI36
NG_007111.1:g.21498G>A , LRG_219:g.21498G>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.1364G>A (MSH6)	ENSP00000406248.2:p.Arg455His
ENST00000420813.6:c.1364G>A (MSH6)	ENSP00000390382.2:p.Arg455His
ENST00000455383.6:c.1364G>A (MSH6)	ENSP00000397484.2:p.Arg455His
ENST00000700004.2:c.1661G>A (MSH6)	ENSP00000514752.2:p.Arg554His
ENST00000699999.1:n.1745G>A (MSH6)
ENST00000700000.1:c.1606+55G>A (MSH6)	ENSP00000514749.1:n.1606+55G>A
ENST00000700002.1:c.1667G>A (MSH6)	ENSP00000514750.1:p.Arg556His
ENST00000700003.1:c.627+3581G>A (MSH6)	ENSP00000514751.1:n.627+3581G>A
ENST00000700004.1:c.818G>A (MSH6)	ENSP00000514752.1:p.Arg273His
ENST00000234420.11:c.1661G>A (MSH6) MANE Select	ENSP00000234420.5:p.Arg554His
ENST00000540021.6:c.1271G>A (MSH6)	ENSP00000446475.1:p.Arg424His
ENST00000652107.1:c.1364G>A (MSH6)	ENSP00000498629.1:p.Arg455His
ENST00000673637.1:c.1364G>A (MSH6)	ENSP00000501310.1:p.Arg455His
ENST00000234420.9:c.1661G>A (MSH6)	ENSP00000234420.4:p.Arg554His
ENST00000405808.5:c.169+8551C>T (FBXO11)	ENSP00000385127.1:n.169+8551C>T
ENST00000434234.5:c.*124+8350C>T (FBXO11)	ENSP00000402692.1:n.*124+8350C>T
ENST00000445503.5:c.*1008G>A (MSH6)	ENSP00000405294.1:n.*1008G>A
ENST00000538136.1:c.755G>A (MSH6)	ENSP00000438580.1:p.Arg252His
ENST00000540021.5:c.1271G>A (MSH6)	ENSP00000446475.1:p.Arg424His
ENST00000614496.4:c.755G>A (MSH6)	ENSP00000477844.1:p.Arg252His
ENST00000616033.4:c.1658G>A (MSH6)	ENSP00000480261.1:p.Arg553His
ENST00000622629.4:c.-1436G>A (MSH6)	ENSP00000482078.1:n.-1436G>A
NM_000179.2:c.1661G>A , LRG_219t1:c.1661G>A (MSH6)	NP_000170.1:p.Arg554His
NM_001281492.1:c.1271G>A (MSH6)	NP_001268421.1:p.Arg424His
NM_001281493.1:c.755G>A (MSH6)	NP_001268422.1:p.Arg252His
NM_001281494.1:c.755G>A (MSH6)	NP_001268423.1:p.Arg252His
XM_005264271.1:c.1364G>A (MSH6)	XP_005264328.1:p.Arg455His
XM_011532798.1:c.1478G>A (MSH6)	XP_011531100.1:p.Arg493His
XM_011532799.1:c.1364G>A (MSH6)	XP_011531101.1:p.Arg455His
XM_011532800.1:c.1364G>A (MSH6)	XP_011531102.1:p.Arg455His
XM_024452819.1:c.1661G>A (MSH6)	XP_024308587.1:p.Arg554His
XM_024452820.1:c.1478G>A (MSH6)	XP_024308588.1:p.Arg493His
XM_024452821.1:c.1364G>A (MSH6)	XP_024308589.1:p.Arg455His
XM_024452822.1:c.755G>A (MSH6)	XP_024308590.1:p.Arg252His
NM_000179.3:c.1661G>A (MSH6) MANE Select	NP_000170.1:p.Arg554His
NM_001281492.2:c.1271G>A (MSH6)	NP_001268421.1:p.Arg424His
NM_001281493.2:c.755G>A (MSH6)	NP_001268422.1:p.Arg252His
NM_001281494.2:c.755G>A (MSH6)	NP_001268423.1:p.Arg252His