Canonical Allele Identifier: CA007699
Gene: MLH1 HGNC NCBI

Linked Data

ClinVar Variation Id: 89952
dbSNP Id: rs63750109
gnomAD v2: 3-37090050-G-A
gnomAD v3: 3-37048559-G-A
gnomAD v4: 3-37048559-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.37048559G>A , CM000665.2:g.37048559G>A GRCh38
NC_000003.11:g.37090050G>A , CM000665.1:g.37090050G>A GRCh37
NC_000003.10:g.37065054G>A NCBI36
NG_007109.2:g.60210G>A , LRG_216:g.60210G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000413740.2:c.1668-1927G>A ENSP00000416476.2:n.1668-1927G>A
ENST00000429117.6:c.1645G>A ENSP00000407019.2:p.Val549Met
ENST00000450420.6:c.1559-1927G>A ENSP00000393006.2:n.1559-1927G>A
ENST00000456676.7:c.1896+876G>A ENSP00000416687.3:n.1896+876G>A
ENST00000492474.6:c.1216G>A ENSP00000518393.1:p.Val406Met
ENST00000616768.6:c.1897-345G>A ENSP00000480669.3:n.1897-345G>A
ENST00000673673.2:c.1774G>A ENSP00000500979.2:p.Val592Met
ENST00000231790.8:c.1939G>A MANE Select ENSP00000231790.3:p.Val647Met
ENST00000413212.2:c.*857G>A ENSP00000400844.2:n.*857G>A
ENST00000432299.6:c.*1771G>A ENSP00000416783.1:n.*1771G>A
ENST00000447829.6:c.*1050G>A ENSP00000399329.2:n.*1050G>A
ENST00000539477.6:c.1216G>A ENSP00000443665.1:p.Val406Met
ENST00000616768.5:c.934-345G>A ENSP00000480669.2:n.934-345G>A
ENST00000673673.1:c.1727G>A
ENST00000673741.1:n.973G>A
ENST00000673889.1:n.1321G>A
ENST00000673897.1:c.*1731G>A ENSP00000501109.1:n.*1731G>A
ENST00000673899.1:c.1207G>A ENSP00000501030.1:p.Val403Met
ENST00000673947.1:c.*2079G>A ENSP00000501304.1:n.*2079G>A
ENST00000673972.1:c.*1817G>A ENSP00000501281.1:n.*1817G>A
ENST00000674019.1:c.1216G>A ENSP00000501081.1:p.Val406Met
ENST00000674111.1:c.*168G>A ENSP00000501162.1:n.*168G>A
ENST00000674125.1:n.650G>A
ENST00000231790.6:c.1939G>A ENSP00000231790.2:p.Val647Met
ENST00000413740.1:c.291-1927G>A ENSP00000416476.1:n.291-1927G>A
ENST00000435176.5:c.1645G>A ENSP00000402564.1:p.Val549Met
ENST00000450420.5:c.182-1927G>A ENSP00000393006.1:n.182-1927G>A
ENST00000455445.6:c.1216G>A ENSP00000398272.2:p.Val406Met
ENST00000456676.6:c.1871+876G>A
ENST00000458205.6:c.1216G>A ENSP00000402667.2:p.Val406Met
ENST00000536378.5:c.1216G>A ENSP00000444286.2:p.Val406Met
ENST00000539477.5:c.1216G>A ENSP00000443665.1:p.Val406Met
NM_000249.3:c.1939G>A , LRG_216t1:c.1939G>A NP_000240.1:p.Val647Met
NM_001167617.1:c.1645G>A NP_001161089.1:p.Val549Met
NM_001167618.1:c.1216G>A NP_001161090.1:p.Val406Met
NM_001167619.1:c.1216G>A NP_001161091.1:p.Val406Met
NM_001258271.1:c.1896+876G>A NP_001245200.1:n.1896+876G>A
NM_001258273.1:c.1216G>A NP_001245202.1:p.Val406Met
NM_001258274.1:c.1216G>A NP_001245203.1:p.Val406Met
XM_005265161.1:c.1732G>A XP_005265218.1:p.Val578Met
XM_005265163.1:c.1216G>A XP_005265220.1:p.Val406Met
XM_005265164.1:c.1216G>A XP_005265221.1:p.Val406Met
XM_005265166.1:c.916G>A XP_005265223.1:p.Val306Met
XM_011533727.1:c.865G>A XP_011532029.1:p.Val289Met
NM_001167617.2:c.1645G>A NP_001161089.1:p.Val549Met
NM_001167618.2:c.1216G>A NP_001161090.1:p.Val406Met
NM_001167619.2:c.1216G>A NP_001161091.1:p.Val406Met
NM_001258274.2:c.1216G>A NP_001245203.1:p.Val406Met
NM_001354615.1:c.1216G>A NP_001341544.1:p.Val406Met
NM_001354616.1:c.1216G>A NP_001341545.1:p.Val406Met
NM_001354617.1:c.1216G>A NP_001341546.1:p.Val406Met
NM_001354618.1:c.1216G>A NP_001341547.1:p.Val406Met
NM_001354619.1:c.1216G>A NP_001341548.1:p.Val406Met
NM_001354620.1:c.1645G>A NP_001341549.1:p.Val549Met
NM_001354621.1:c.916G>A NP_001341550.1:p.Val306Met
NM_001354622.1:c.916G>A NP_001341551.1:p.Val306Met
NM_001354623.1:c.916G>A NP_001341552.1:p.Val306Met
NM_001354624.1:c.865G>A NP_001341553.1:p.Val289Met
NM_001354625.1:c.865G>A NP_001341554.1:p.Val289Met
NM_001354626.1:c.865G>A NP_001341555.1:p.Val289Met
NM_001354627.1:c.865G>A NP_001341556.1:p.Val289Met
NM_001354628.1:c.1897-345G>A NP_001341557.1:n.1897-345G>A
NM_001354629.1:c.1840G>A NP_001341558.1:p.Val614Met
NM_001354630.1:c.1774G>A NP_001341559.1:p.Val592Met
XM_005265161.2:c.1732G>A XP_005265218.1:p.Val578Met
XM_017006450.2:c.916G>A XP_016861939.1:p.Val306Met
NM_000249.4:c.1939G>A MANE Select NP_000240.1:p.Val647Met
NM_001167617.3:c.1645G>A NP_001161089.1:p.Val549Met
NM_001167618.3:c.1216G>A NP_001161090.1:p.Val406Met
NM_001167619.3:c.1216G>A NP_001161091.1:p.Val406Met
NM_001258271.2:c.1896+876G>A NP_001245200.1:n.1896+876G>A
NM_001258273.2:c.1216G>A NP_001245202.1:p.Val406Met
NM_001258274.3:c.1216G>A NP_001245203.1:p.Val406Met
NM_001354615.2:c.1216G>A NP_001341544.1:p.Val406Met
NM_001354616.2:c.1216G>A NP_001341545.1:p.Val406Met
NM_001354617.2:c.1216G>A NP_001341546.1:p.Val406Met
NM_001354618.2:c.1216G>A NP_001341547.1:p.Val406Met
NM_001354619.2:c.1216G>A NP_001341548.1:p.Val406Met
NM_001354620.2:c.1645G>A NP_001341549.1:p.Val549Met
NM_001354621.2:c.916G>A NP_001341550.1:p.Val306Met
NM_001354622.2:c.916G>A NP_001341551.1:p.Val306Met
NM_001354623.2:c.916G>A NP_001341552.1:p.Val306Met
NM_001354624.2:c.865G>A NP_001341553.1:p.Val289Met
NM_001354625.2:c.865G>A NP_001341554.1:p.Val289Met
NM_001354626.2:c.865G>A NP_001341555.1:p.Val289Met
NM_001354627.2:c.865G>A NP_001341556.1:p.Val289Met
NM_001354628.2:c.1897-345G>A NP_001341557.1:n.1897-345G>A
NM_001354629.2:c.1840G>A NP_001341558.1:p.Val614Met
NM_001354630.2:c.1774G>A NP_001341559.1:p.Val592Met