Canonical Allele Identifier: CA915942880
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 659179
ClinVar RCV Id: RCV000816143
dbSNP Id: rs1574051665

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166012192_166012204del , CM000664.2:g.166012192_166012204del GRCh38
NC_000002.11:g.166868702_166868714del , CM000664.1:g.166868702_166868714del GRCh37
NC_000002.10:g.166576948_166576960del NCBI36
NG_011906.1:g.66437_66449del , LRG_8:g.66437_66449del

Transcript Alleles

HGVS Amino-acid change
ENST00000689288.1:c.*1821_*1833del ENSP00000509637.1:n.*1821_*1833del
ENST00000303395.9:c.3785_3797del ENSP00000303540.4:p.Ile1262LysfsTer4
ENST00000635750.1:c.3752_3764del ENSP00000490799.1:p.Ile1251LysfsTer4
ENST00000635776.1:c.3752_3764del ENSP00000490692.1:p.Ile1251LysfsTer4
ENST00000636194.1:c.*1278_*1290del ENSP00000490288.1:n.*1278_*1290del
ENST00000637038.1:c.583_595del
ENST00000637968.1:n.4037_4049del
ENST00000637988.1:c.3752_3764del ENSP00000490780.1:p.Ile1251LysfsTer4
ENST00000640036.1:c.3752_3764del ENSP00000491573.1:p.Ile1251LysfsTer4
ENST00000641575.1:c.3749_3761del ENSP00000492917.1:p.Ile1250LysfsTer4
ENST00000641603.1:c.3785_3797del ENSP00000492945.1:p.Ile1262LysfsTer4
ENST00000641996.1:c.*3339_*3351del ENSP00000493054.1:n.*3339_*3351del
ENST00000671940.1:c.*1728_*1740del ENSP00000500336.1:n.*1728_*1740del
ENST00000673490.1:n.6258_6270del
ENST00000674923.1:c.3785_3797del MANE Select ENSP00000501589.1:p.Ile1262LysfsTer4
ENST00000303395.8:c.3785_3797del ENSP00000303540.4:p.Ile1262LysfsTer4
ENST00000375405.7:c.3752_3764del ENSP00000364554.3:p.Ile1251LysfsTer4
ENST00000409050.1:c.3701_3713del ENSP00000386312.1:p.Ile1234LysfsTer4
ENST00000423058.6:c.3785_3797del ENSP00000407030.2:p.Ile1262LysfsTer4
NM_001165963.1:c.3785_3797del NP_001159435.1:p.Ile1262LysfsTer4
NM_001165964.1:c.3701_3713del NP_001159436.1:p.Ile1234LysfsTer4
NM_001202435.1:c.3785_3797del NP_001189364.1:p.Ile1262LysfsTer4
NM_006920.4:c.3752_3764del , LRG_8t1:c.3752_3764del NP_008851.3:p.Ile1251LysfsTer4
NR_110598.1:n.176-3421_176-3409del
XM_011511598.1:c.3785_3797del XP_011509900.1:p.Ile1262LysfsTer4
XM_011511599.1:c.3785_3797del XP_011509901.1:p.Ile1262LysfsTer4
XM_011511600.1:c.3785_3797del XP_011509902.1:p.Ile1262LysfsTer4
XM_011511601.1:c.3785_3797del XP_011509903.1:p.Ile1262LysfsTer4
XM_011511602.1:c.3785_3797del XP_011509904.1:p.Ile1262LysfsTer4
XM_011511603.1:c.3782_3794del XP_011509905.1:p.Ile1261LysfsTer4
XM_011511604.1:c.3752_3764del XP_011509906.1:p.Ile1251LysfsTer4
XM_011511605.1:c.3749_3761del XP_011509907.1:p.Ile1250LysfsTer4
XM_011511606.1:c.3701_3713del XP_011509908.1:p.Ile1234LysfsTer4
XM_011511607.1:c.3785_3797del XP_011509909.1:p.Ile1262LysfsTer4
XR_922981.1:n.3969_3981del
NM_001165963.2:c.3785_3797del NP_001159435.1:p.Ile1262LysfsTer4
NM_001165964.2:c.3701_3713del NP_001159436.1:p.Ile1234LysfsTer4
NM_001202435.2:c.3785_3797del NP_001189364.1:p.Ile1262LysfsTer4
NM_001353948.1:c.3785_3797del NP_001340877.1:p.Ile1262LysfsTer4
NM_001353949.1:c.3752_3764del NP_001340878.1:p.Ile1251LysfsTer4
NM_001353950.1:c.3752_3764del NP_001340879.1:p.Ile1251LysfsTer4
NM_001353951.1:c.3752_3764del NP_001340880.1:p.Ile1251LysfsTer4
NM_001353952.1:c.3752_3764del NP_001340881.1:p.Ile1251LysfsTer4
NM_001353954.1:c.3749_3761del NP_001340883.1:p.Ile1250LysfsTer4
NM_001353955.1:c.3749_3761del NP_001340884.1:p.Ile1250LysfsTer4
NM_001353957.1:c.3701_3713del NP_001340886.1:p.Ile1234LysfsTer4
NM_001353958.1:c.3701_3713del NP_001340887.1:p.Ile1234LysfsTer4
NM_001353960.1:c.3698_3710del NP_001340889.1:p.Ile1233LysfsTer4
NM_001353961.1:c.1343_1355del NP_001340890.1:p.Ile448LysfsTer4
NM_006920.5:c.3752_3764del NP_008851.3:p.Ile1251LysfsTer4
NR_148667.1:n.4157_4169del
XR_001738883.1:n.4171_4183del
XR_001738884.1:n.4143_4155del
NM_001165963.3:c.3785_3797del NP_001159435.1:p.Ile1262LysfsTer4
NM_001165964.3:c.3701_3713del NP_001159436.1:p.Ile1234LysfsTer4
NM_001202435.3:c.3785_3797del NP_001189364.1:p.Ile1262LysfsTer4
NM_001353948.2:c.3785_3797del NP_001340877.1:p.Ile1262LysfsTer4
NM_001353949.2:c.3752_3764del NP_001340878.1:p.Ile1251LysfsTer4
NM_001353950.2:c.3752_3764del NP_001340879.1:p.Ile1251LysfsTer4
NM_001353951.2:c.3752_3764del NP_001340880.1:p.Ile1251LysfsTer4
NM_001353952.2:c.3752_3764del NP_001340881.1:p.Ile1251LysfsTer4
NM_001353954.2:c.3749_3761del NP_001340883.1:p.Ile1250LysfsTer4
NM_001353955.2:c.3749_3761del NP_001340884.1:p.Ile1250LysfsTer4
NM_001353957.2:c.3701_3713del NP_001340886.1:p.Ile1234LysfsTer4
NM_001353958.2:c.3701_3713del NP_001340887.1:p.Ile1234LysfsTer4
NM_001353960.2:c.3698_3710del NP_001340889.1:p.Ile1233LysfsTer4
NM_001353961.2:c.1343_1355del NP_001340890.1:p.Ile448LysfsTer4
NM_006920.6:c.3752_3764del NP_008851.3:p.Ile1251LysfsTer4
NR_148667.2:n.4138_4150del
NM_001165963.4:c.3785_3797del MANE Select NP_001159435.1:p.Ile1262LysfsTer4