Canonical Allele Identifier: CA59783975

Gene: SCN9A SCN1A-AS1

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166199475G>A , CM000664.2:g.166199475G>A	GRCh38
NC_000002.11:g.167055985G>A , CM000664.1:g.167055985G>A	GRCh37
NC_000002.10:g.166764231G>A	NCBI36
NG_012798.1:g.181513C>T , LRG_369:g.181513C>T

Transcript Alleles

HGVS	Amino-acid Change
NM_001365536.1:c.5164C>T (SCN9A) MANE Select	NP_001352465.1:p.Pro1722Ser
ENST00000642356.2:c.5164C>T (SCN9A) MANE Select	ENSP00000495601.1:p.Pro1722Ser
NM_002977.3:c.5131C>T , LRG_369t1:c.5131C>T (SCN9A)	NP_002968.1:p.Pro1711Ser
NR_110260.1:n.432-164G>A (SCN1A-AS1)
ENST00000303354.10:c.5164C>T (SCN9A)	ENSP00000304748.7:p.Pro1722Ser
ENST00000303354.11:c.5164C>T (SCN9A)	ENSP00000304748.7:p.Pro1722Ser
ENST00000409435.5:c.5164C>T (SCN9A)	ENSP00000386330.1:p.Pro1722Ser
ENST00000409435.6:c.5164C>T (SCN9A)	ENSP00000386330.2:p.Pro1722Ser
ENST00000409672.5:c.5131C>T (SCN9A)	ENSP00000386306.1:p.Pro1711Ser
ENST00000644316.1:c.5008C>T (SCN9A)	ENSP00000493939.1:p.Pro1670Ser
ENST00000645907.1:c.5131C>T (SCN9A)	ENSP00000495983.1:p.Pro1711Ser
ENST00000646694.1:n.1541C>T (SCN9A)
XM_005246757.1:c.5164C>T (SCN9A)	XP_005246814.1:p.Pro1722Ser
XM_011511616.1:c.5164C>T (SCN9A)	XP_011509918.1:p.Pro1722Ser
XM_011511616.3:c.5164C>T (SCN9A)	XP_011509918.1:p.Pro1722Ser
XM_011511617.1:c.5164C>T (SCN9A)	XP_011509919.1:p.Pro1722Ser
XM_011511617.2:c.5164C>T (SCN9A)	XP_011509919.1:p.Pro1722Ser
XM_011511618.1:c.5131C>T (SCN9A)	XP_011509920.1:p.Pro1711Ser
XM_011511618.2:c.5131C>T (SCN9A)	XP_011509920.1:p.Pro1711Ser
XM_017004668.1:c.4777C>T (SCN9A)	XP_016860157.1:p.Pro1593Ser
XM_017004669.1:c.4420C>T (SCN9A)	XP_016860158.1:p.Pro1474Ser