Canonical Allele Identifier: CA589149511

Gene: SPTLC1

Linked Data

• dbSNP Id: rs1414445393
• gnomAD v2: 9-94794691-G-A
• gnomAD v4: 9-92032409-G-A
• MyVariant Identifiers: chr9:g.94794691G>A (hg19) ; chr9:g.92032409G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000009.12:g.92032409G>A , CM000671.2:g.92032409G>A	GRCh38
NC_000009.11:g.94794691G>A , CM000671.1:g.94794691G>A	GRCh37
NC_000009.10:g.93834512G>A	NCBI36
NG_007950.1:g.88000C>T , LRG_272:g.88000C>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000686600.1:c.*190C>T	ENSP00000509268.1:n.*190C>T
ENST00000686799.1:n.1802C>T
ENST00000687427.1:c.*234C>T	ENSP00000509426.1:n.*234C>T
ENST00000687817.1:c.*3876C>T	ENSP00000508926.1:n.*3876C>T
ENST00000687972.1:c.*56C>T	ENSP00000509208.1:n.*56C>T
ENST00000689261.1:n.1385C>T
ENST00000689401.1:c.*1728C>T	ENSP00000510251.1:n.*1728C>T
ENST00000690095.1:n.1866C>T
ENST00000690139.1:c.*1179C>T	ENSP00000510483.1:n.*1179C>T
ENST00000692458.1:n.2116C>T
ENST00000262554.7:c.*56C>T MANE Select	ENSP00000262554.2:n.*56C>T
ENST00000642671.1:c.1629+2401C>T	ENSP00000495764.1:n.1629+2401C>T
ENST00000643599.1:c.1396+2401C>T	ENSP00000494770.1:n.1396+2401C>T
ENST00000644140.1:c.*1219C>T	ENSP00000493933.1:n.*1219C>T
ENST00000646481.1:c.1260+2401C>T	ENSP00000496627.1:n.1260+2401C>T
ENST00000646534.1:c.*1281C>T	ENSP00000495388.1:n.*1281C>T
ENST00000262554.6:c.*56C>T	ENSP00000262554.2:n.*56C>T
ENST00000469778.1:n.435C>T
NM_001281303.1:c.1446C>T	NP_001268232.1:p.Asp482=
NM_006415.3:c.*56C>T	NP_006406.1:n.*56C>T
XM_011518139.1:c.*56C>T	XP_011516441.1:n.*56C>T
XM_011518139.3:c.*56C>T	XP_011516441.1:n.*56C>T
XM_017014200.2:c.*56C>T	XP_016869689.1:n.*56C>T
XM_017014201.2:c.*56C>T	XP_016869690.1:n.*56C>T
XM_024447378.1:c.*56C>T	XP_024303146.1:n.*56C>T
XM_024447379.1:c.*56C>T	XP_024303147.1:n.*56C>T
XR_002956744.1:n.1628C>T
NM_006415.4:c.*56C>T MANE Select	NP_006406.1:n.*56C>T
NM_001281303.2:c.1446C>T	NP_001268232.1:p.Asp482=
NM_001368272.1:c.*56C>T	NP_001355201.1:n.*56C>T
NM_001368273.1:c.*56C>T	NP_001355202.1:n.*56C>T