Canonical Allele Identifier: CA5519233

Gene: JMJD1C JMJD1C-AS1

Linked Data

• ClinVar Variation Id: 569840
• ClinVar RCV Id: RCV000690566 ; RCV004025059
• dbSNP Id: rs766414903
• ExAC: 10:65225365 C / T
• gnomAD v2: 10-65225365-C-T
• gnomAD v3: 10-63465605-C-T
• gnomAD v4: 10-63465605-C-T
• MyVariant Identifiers: chr10:g.65225365C>T (hg19) ; chr10:g.63465605C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000010.11:g.63465605C>T , CM000672.2:g.63465605C>T	GRCh38
NC_000010.10:g.65225365C>T , CM000672.1:g.65225365C>T	GRCh37
NC_000010.9:g.64895371C>T	NCBI36
NG_053187.1:g.61471G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000399262.7:c.58G>A (JMJD1C) MANE Select	ENSP00000382204.2:p.Gly20Ser
ENST00000399262.6:c.58G>A (JMJD1C)	ENSP00000382204.2:p.Gly20Ser
ENST00000633035.1:n.113+56133G>A (JMJD1C)
NM_032776.2:c.58G>A (JMJD1C)	NP_116165.1:p.Gly20Ser
NR_027182.1:n.377C>T (JMJD1C-AS1)
NM_001318154.1:c.-379+56133G>A (JMJD1C)	NP_001305083.1:n.-379+56133G>A
NM_001322252.1:c.58G>A (JMJD1C)	NP_001309181.1:p.Gly20Ser
NM_001322258.1:c.-384+56133G>A (JMJD1C)	NP_001309187.1:n.-384+56133G>A
XM_017015897.1:c.-265+56133G>A (JMJD1C)	XP_016871386.1:n.-265+56133G>A
XM_017015899.1:c.-701+56133G>A (JMJD1C)	XP_016871388.1:n.-701+56133G>A
XM_017015900.1:c.-811G>A (JMJD1C)	XP_016871389.1:n.-811G>A
XM_017015901.1:c.-595+56133G>A (JMJD1C)	XP_016871390.1:n.-595+56133G>A
XM_017015902.1:c.-705G>A (JMJD1C)	XP_016871391.1:n.-705G>A
XM_017015903.1:c.-481+56133G>A (JMJD1C)	XP_016871392.1:n.-481+56133G>A
XM_024447882.1:c.-494G>A (JMJD1C)	XP_024303650.1:n.-494G>A
NM_032776.3:c.58G>A (JMJD1C) MANE Select	NP_116165.1:p.Gly20Ser
NM_001318154.2:c.-379+56133G>A (JMJD1C)	NP_001305083.1:n.-379+56133G>A
NM_001322252.2:c.58G>A (JMJD1C)	NP_001309181.1:p.Gly20Ser
NM_001322258.2:c.-384+56133G>A (JMJD1C)	NP_001309187.1:n.-384+56133G>A