Canonical Allele Identifier: CA537511608

Gene: SCN9A SCN1A-AS1

Linked Data

• dbSNP Id: rs1468862553
• gnomAD v2: 2-167090003-CAAT-C
• gnomAD v3: 2-166233493-CAAT-C
• gnomAD v4: 2-166233493-CAAT-C
• MyVariant Identifiers: chr2:g.167090004_167090006del (hg19) ; chr2:g.166233494_166233496del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166233496_166233498del , CM000664.2:g.166233496_166233498del	GRCh38
NC_000002.11:g.167090006_167090008del , CM000664.1:g.167090006_167090008del	GRCh37
NC_000002.10:g.166798252_166798254del	NCBI36
NG_012798.1:g.147492_147494del , LRG_369:g.147492_147494del

Transcript Alleles

HGVS	Amino-acid change
ENST00000303354.11:c.3802-34_3802-32del (SCN9A)	ENSP00000304748.7:n.3802-34_3802-32del
ENST00000409435.6:c.3802-34_3802-32del (SCN9A)	ENSP00000386330.2:n.3802-34_3802-32del
ENST00000642356.2:c.3802-34_3802-32del (SCN9A) MANE Select	ENSP00000495601.1:n.3802-34_3802-32del
ENST00000644316.1:c.3769-4524_3769-4522del (SCN9A)	ENSP00000493939.1:n.3769-4524_3769-4522de...
ENST00000645907.1:c.3769-34_3769-32del (SCN9A)	ENSP00000495983.1:n.3769-34_3769-32del
ENST00000303354.10:c.3802-34_3802-32del (SCN9A)	ENSP00000304748.7:n.3802-34_3802-32del
ENST00000409435.5:c.3802-34_3802-32del (SCN9A)	ENSP00000386330.1:n.3802-34_3802-32del
ENST00000409672.5:c.3769-34_3769-32del (SCN9A)	ENSP00000386306.1:n.3769-34_3769-32del
NM_002977.3:c.3769-34_3769-32del , LRG_369t1:c.3769-34_3769-32del (SCN9A)	NP_002968.1:n.3769-34_3769-32del
NR_110260.1:n.612-14699_612-14697del (SCN1A-AS1)
XM_005246757.1:c.3802-34_3802-32del (SCN9A)	XP_005246814.1:n.3802-34_3802-32del
XM_011511616.1:c.3802-34_3802-32del (SCN9A)	XP_011509918.1:n.3802-34_3802-32del
XM_011511617.1:c.3802-34_3802-32del (SCN9A)	XP_011509919.1:n.3802-34_3802-32del
XM_011511618.1:c.3769-34_3769-32del (SCN9A)	XP_011509920.1:n.3769-34_3769-32del
XM_011511619.1:c.3802-34_3802-32del (SCN9A)	XP_011509921.1:n.3802-34_3802-32del
NM_001365536.1:c.3802-34_3802-32del (SCN9A) MANE Select	NP_001352465.1:n.3802-34_3802-32del
XM_011511616.3:c.3802-34_3802-32del (SCN9A)	XP_011509918.1:n.3802-34_3802-32del
XM_011511617.2:c.3802-34_3802-32del (SCN9A)	XP_011509919.1:n.3802-34_3802-32del
XM_011511618.2:c.3769-34_3769-32del (SCN9A)	XP_011509920.1:n.3769-34_3769-32del
XM_011511619.2:c.3802-34_3802-32del (SCN9A)	XP_011509921.1:n.3802-34_3802-32del
XM_017004668.1:c.3415-34_3415-32del (SCN9A)	XP_016860157.1:n.3415-34_3415-32del
XM_017004669.1:c.3058-34_3058-32del (SCN9A)	XP_016860158.1:n.3058-34_3058-32del