Canonical Allele Identifier: CA522580778
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 509422
ClinVar RCV Id: RCV002063239
dbSNP Id: rs1209878503
gnomAD v2: 1-46655256-G-A
gnomAD v3: 1-46189584-G-A
gnomAD v4: 1-46189584-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189584G>A , CM000663.2:g.46189584G>A GRCh38
NC_000001.10:g.46655256G>A , CM000663.1:g.46655256G>A GRCh37
NC_000001.9:g.46427843G>A NCBI36
NG_009205.2:g.35722C>T
NG_009205.3:g.35722C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000396420.8:c.1786-17C>T (POMGNT1) ENSP00000379698.4:n.1786-17C>T
ENST00000497439.6:n.1958-17C>T (POMGNT1)
ENST00000684817.1:n.2146-17C>T (POMGNT1)
ENST00000684898.1:n.2348-17C>T (POMGNT1)
ENST00000685230.1:c.*1096-17C>T (POMGNT1) ENSP00000510305.1:n.*1096-17C>T
ENST00000685275.1:n.2333-17C>T (POMGNT1)
ENST00000685444.1:c.1687-17C>T (POMGNT1) ENSP00000510762.1:n.1687-17C>T
ENST00000685704.1:n.2452-17C>T (POMGNT1)
ENST00000685833.1:n.4179-17C>T (POMGNT1)
ENST00000686252.1:n.2860-17C>T (POMGNT1)
ENST00000686379.1:c.*910-17C>T (POMGNT1) ENSP00000508913.1:n.*910-17C>T
ENST00000686724.1:n.3473-17C>T (POMGNT1)
ENST00000686737.1:c.1786-17C>T (POMGNT1) ENSP00000508736.1:n.1786-17C>T
ENST00000687112.1:n.2652-17C>T (POMGNT1)
ENST00000687149.1:c.1825-17C>T (POMGNT1) ENSP00000509745.1:n.1825-17C>T
ENST00000687197.1:c.*726-17C>T (POMGNT1) ENSP00000510749.1:n.*726-17C>T
ENST00000687235.1:n.3863-17C>T (POMGNT1)
ENST00000687613.1:n.2426-17C>T (POMGNT1)
ENST00000687683.1:c.1786-17C>T (POMGNT1) ENSP00000508522.1:n.1786-17C>T
ENST00000688032.1:n.2323-17C>T (POMGNT1)
ENST00000688596.1:n.2437-17C>T (POMGNT1)
ENST00000688608.1:c.1687-17C>T (POMGNT1) ENSP00000508890.1:n.1687-17C>T
ENST00000689031.1:n.2238-17C>T (POMGNT1)
ENST00000689756.1:c.*1418-17C>T (POMGNT1) ENSP00000509023.1:n.*1418-17C>T
ENST00000690377.1:n.2133-17C>T (POMGNT1)
ENST00000690678.1:c.1786-17C>T (POMGNT1) ENSP00000508703.1:n.1786-17C>T
ENST00000691185.1:n.240C>T (POMGNT1)
ENST00000691209.1:c.*726-17C>T (POMGNT1) ENSP00000510112.1:n.*726-17C>T
ENST00000691243.1:c.*177-17C>T (POMGNT1) ENSP00000510654.1:n.*177-17C>T
ENST00000692202.1:n.2361-17C>T (POMGNT1)
ENST00000692322.1:c.*1573-17C>T (POMGNT1) ENSP00000509017.1:n.*1573-17C>T
ENST00000692369.1:c.1786-17C>T (POMGNT1) ENSP00000508453.1:n.1786-17C>T
ENST00000692599.1:n.3661-17C>T (POMGNT1)
ENST00000692635.1:c.*661-17C>T (POMGNT1) ENSP00000508425.1:n.*661-17C>T
ENST00000693168.1:n.3562-17C>T (POMGNT1)
ENST00000693218.1:c.*347-17C>T (POMGNT1) ENSP00000510577.1:n.*347-17C>T
ENST00000693223.1:n.2734-17C>T (POMGNT1)
ENST00000371984.8:c.1786-17C>T (POMGNT1) MANE Select ENSP00000361052.3:n.1786-17C>T
ENST00000371984.7:c.1786-17C>T (POMGNT1) ENSP00000361052.3:n.1786-17C>T
ENST00000371992.1:c.1786-17C>T (POMGNT1) ENSP00000361060.1:n.1786-17C>T
ENST00000396420.7:c.*1455-17C>T (POMGNT1) ENSP00000379698.3:n.*1455-17C>T
ENST00000480972.1:n.435-17C>T (POMGNT1)
NM_001243766.1:c.1786-17C>T (POMGNT1) NP_001230695.1:n.1786-17C>T
NM_001290129.1:c.1720-17C>T (POMGNT1) NP_001277058.1:n.1720-17C>T
NM_001290130.1:c.1357-17C>T (POMGNT1) NP_001277059.1:n.1357-17C>T
NM_017739.3:c.1786-17C>T (POMGNT1) NP_060209.3:n.1786-17C>T
XM_005271010.1:c.1786-17C>T (POMGNT1) XP_005271067.1:n.1786-17C>T
XM_006710755.1:c.1786-17C>T (POMGNT1) XP_006710818.1:n.1786-17C>T
XM_006710756.1:c.1786-17C>T (POMGNT1) XP_006710819.1:n.1786-17C>T
XM_011540460.1:c.678+4276G>A (TSPAN1) XP_011538762.1:n.678+4276G>A
XM_011540461.1:c.633+4276G>A (TSPAN1) XP_011538763.1:n.633+4276G>A
XM_011541759.1:c.1720-17C>T (POMGNT1) XP_011540061.1:n.1720-17C>T
XM_011541760.1:c.1720-17C>T (POMGNT1) XP_011540062.1:n.1720-17C>T
XM_011541761.1:c.694-17C>T (POMGNT1) XP_011540063.1:n.694-17C>T
XM_011540460.3:c.678+4276G>A (TSPAN1) XP_011538762.1:n.678+4276G>A
XM_011541760.3:c.1720-17C>T (POMGNT1) XP_011540062.1:n.1720-17C>T
XM_017001690.1:c.1786-17C>T (POMGNT1) XP_016857179.1:n.1786-17C>T
NM_001243766.2:c.1786-17C>T (POMGNT1) NP_001230695.2:n.1786-17C>T
NM_001290129.2:c.1720-17C>T (POMGNT1) NP_001277058.2:n.1720-17C>T
NM_001290130.2:c.1357-17C>T (POMGNT1) NP_001277059.2:n.1357-17C>T
NM_017739.4:c.1786-17C>T (POMGNT1) MANE Select NP_060209.4:n.1786-17C>T