Canonical Allele Identifier: CA453642319
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 702018
ClinVar RCV Id: RCV002454009
dbSNP Id: rs1583279664
COSMIC: COSM121598
MyVariant Identifiers: chr7:g.6017240G>A (hg19)

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5977609G>A , CM000669.2:g.5977609G>A GRCh38
NC_000007.13:g.6017240G>A , CM000669.1:g.6017240G>A GRCh37
NC_000007.12:g.5983766G>A NCBI36
NG_008466.1:g.36498C>T , LRG_161:g.36498C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1820C>T ENSP00000514615.2:n.*1820C>T
ENST00000699840.2:c.2421C>T ENSP00000514638.2:p.Ala807=
ENST00000699930.2:c.2316C>T ENSP00000514695.2:p.Ala772=
ENST00000406569.8:c.1784C>T ENSP00000514464.1:n.1784C>T
ENST00000644110.2:c.*2018C>T ENSP00000496392.2:n.*2018C>T
ENST00000699752.1:c.2268C>T ENSP00000514561.1:p.Ala756=
ENST00000699753.1:c.*1845C>T ENSP00000514562.1:n.*1845C>T
ENST00000699754.1:c.2226C>T ENSP00000514563.1:p.Ala742=
ENST00000699755.1:c.*1823C>T ENSP00000514564.1:n.*1823C>T
ENST00000699756.1:c.*2011C>T ENSP00000514565.1:n.*2011C>T
ENST00000699757.1:c.*1681C>T ENSP00000514566.1:n.*1681C>T
ENST00000699758.1:c.*1681C>T ENSP00000514567.1:n.*1681C>T
ENST00000699759.1:n.3278C>T
ENST00000699760.1:c.2106C>T ENSP00000514568.1:p.Ala702=
ENST00000699761.1:c.2019C>T ENSP00000514569.1:p.Ala673=
ENST00000699762.1:c.1851C>T ENSP00000514570.1:p.Ala617=
ENST00000699763.1:c.*1514C>T ENSP00000514571.1:n.*1514C>T
ENST00000699764.1:c.*742C>T ENSP00000514572.1:n.*742C>T
ENST00000699765.1:c.*1419C>T ENSP00000514573.1:n.*1419C>T
ENST00000699766.1:c.2457C>T ENSP00000514574.1:p.Ala819=
ENST00000699767.1:c.*65C>T ENSP00000514575.1:n.*65C>T
ENST00000699768.1:c.2280C>T ENSP00000514576.1:p.Ala760=
ENST00000699811.1:c.2019C>T ENSP00000514614.1:p.Ala673=
ENST00000699813.1:n.2537C>T
ENST00000699814.1:c.2047C>T
ENST00000699815.1:c.*1955C>T ENSP00000514616.1:n.*1955C>T
ENST00000699816.1:c.*1314C>T ENSP00000514617.1:n.*1314C>T
ENST00000699817.1:c.*2018C>T ENSP00000514618.1:n.*2018C>T
ENST00000699818.1:c.2019C>T ENSP00000514619.1:p.Ala673=
ENST00000699819.1:c.*1581C>T ENSP00000514620.1:n.*1581C>T
ENST00000699820.1:c.*362C>T ENSP00000514621.1:n.*362C>T
ENST00000699821.1:c.2052C>T ENSP00000514622.1:p.Ala684=
ENST00000699822.1:c.*1876C>T ENSP00000514623.1:n.*1876C>T
ENST00000699823.1:c.2019C>T ENSP00000514624.1:p.Ala673=
ENST00000699824.1:c.*1927C>T ENSP00000514625.1:n.*1927C>T
ENST00000699825.1:c.1863C>T ENSP00000514626.1:p.Ala621=
ENST00000699826.1:c.*1823C>T ENSP00000514627.1:n.*1823C>T
ENST00000699827.1:c.2256C>T ENSP00000514628.1:p.Ala752=
ENST00000699828.1:c.*1514C>T ENSP00000514629.1:n.*1514C>T
ENST00000699833.1:n.4196C>T
ENST00000699837.1:c.2019C>T ENSP00000514635.1:p.Ala673=
ENST00000699838.1:c.*2324C>T ENSP00000514636.1:n.*2324C>T
ENST00000699839.1:c.2610C>T ENSP00000514637.1:p.Ala870=
ENST00000699916.1:c.*1681C>T ENSP00000514684.1:n.*1681C>T
ENST00000699917.1:c.*1873C>T ENSP00000514685.1:n.*1873C>T
ENST00000699918.1:c.*1925C>T ENSP00000514686.1:n.*1925C>T
ENST00000699919.1:c.*2011C>T ENSP00000514687.1:n.*2011C>T
ENST00000699920.1:c.*2060C>T ENSP00000514688.1:n.*2060C>T
ENST00000699928.1:c.*362C>T ENSP00000514693.1:n.*362C>T
ENST00000699951.1:c.*1477C>T ENSP00000514706.1:n.*1477C>T
ENST00000699952.1:c.804-4067C>T ENSP00000514707.1:n.804-4067C>T
ENST00000265849.12:c.2424C>T MANE Select ENSP00000265849.7:p.Ala808=
ENST00000642292.1:c.2019C>T ENSP00000495524.1:p.Ala673=
ENST00000642456.1:c.2019C>T ENSP00000493814.1:p.Ala673=
ENST00000643595.1:c.*1823C>T ENSP00000494497.1:n.*1823C>T
ENST00000644110.1:c.2106C>T ENSP00000496392.1:p.Ala702=
ENST00000265849.11:c.2424C>T ENSP00000265849.7:p.Ala808=
ENST00000382321.5:c.1221C>T ENSP00000371758.4:p.Ala407=
ENST00000441476.6:c.2106C>T ENSP00000392843.2:p.Ala702=
NM_000535.5:c.2424C>T , LRG_161t1:c.2424C>T NP_000526.1:p.Ala808=
NR_003085.2:n.2506C>T
XM_006715742.2:c.2418C>T XP_006715805.1:p.Ala806=
XM_006715744.2:c.1491C>T XP_006715807.1:p.Ala497=
XM_011515427.1:c.2469C>T XP_011513729.1:p.Ala823=
XM_011515428.1:c.2313C>T XP_011513730.1:p.Ala771=
XM_011515429.1:c.2106C>T XP_011513731.1:p.Ala702=
XM_011515430.1:c.2106C>T XP_011513732.1:p.Ala702=
NM_000535.6:c.2424C>T NP_000526.2:p.Ala808=
NM_001322003.1:c.2019C>T NP_001308932.1:p.Ala673=
NM_001322004.1:c.2019C>T NP_001308933.1:p.Ala673=
NM_001322005.1:c.2019C>T NP_001308934.1:p.Ala673=
NM_001322006.1:c.2268C>T NP_001308935.1:p.Ala756=
NM_001322007.1:c.2106C>T NP_001308936.1:p.Ala702=
NM_001322008.1:c.2106C>T NP_001308937.1:p.Ala702=
NM_001322009.1:c.2052C>T NP_001308938.1:p.Ala684=
NM_001322010.1:c.1863C>T NP_001308939.1:p.Ala621=
NM_001322011.1:c.1491C>T NP_001308940.1:p.Ala497=
NM_001322012.1:c.1491C>T NP_001308941.1:p.Ala497=
NM_001322013.1:c.1851C>T NP_001308942.1:p.Ala617=
NM_001322014.1:c.2457C>T NP_001308943.1:p.Ala819=
NM_001322015.1:c.2115C>T NP_001308944.1:p.Ala705=
NR_136154.1:n.2468C>T
XM_006715744.4:c.1491C>T XP_006715807.1:p.Ala497=
XM_017012342.2:c.1491C>T XP_016867831.1:p.Ala497=
XM_024446800.1:c.1863C>T XP_024302568.1:p.Ala621=
NM_000535.7:c.2424C>T MANE Select NP_000526.2:p.Ala808=
NM_001322003.2:c.2019C>T NP_001308932.1:p.Ala673=
NM_001322004.2:c.2019C>T NP_001308933.1:p.Ala673=
NM_001322005.2:c.2019C>T NP_001308934.1:p.Ala673=
NM_001322006.2:c.2268C>T NP_001308935.1:p.Ala756=
NM_001322008.2:c.2106C>T NP_001308937.1:p.Ala702=
NM_001322009.2:c.2052C>T NP_001308938.1:p.Ala684=
NM_001322010.2:c.1863C>T NP_001308939.1:p.Ala621=
NM_001322011.2:c.1491C>T NP_001308940.1:p.Ala497=
NM_001322012.2:c.1491C>T NP_001308941.1:p.Ala497=
NM_001322013.2:c.1851C>T NP_001308942.1:p.Ala617=
NM_001322014.2:c.2457C>T NP_001308943.1:p.Ala819=
NM_001322015.2:c.2115C>T NP_001308944.1:p.Ala705=
NM_001322007.2:c.2106C>T NP_001308936.1:p.Ala702=