Canonical Allele Identifier: CA419555570

Gene: PTPN22 AP4B1-AS1

Linked Data

• MyVariant Identifiers: chr1:g.114356578T>A (hg19)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113813956T>A , CM000663.2:g.113813956T>A	GRCh38
NC_000001.10:g.114356578T>A , CM000663.1:g.114356578T>A	GRCh37
NC_000001.9:g.114158101T>A	NCBI36
NG_011432.1:g.62798A>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000359785.10:c.*949A>T (PTPN22) MANE Select	ENSP00000352833.5:n.*949A>T
ENST00000359785.9:c.*949A>T (PTPN22)	ENSP00000352833.5:n.*949A>T
ENST00000460620.5:c.*1020A>T (PTPN22)	ENSP00000433141.1:n.*1020A>T
ENST00000528414.5:c.*949A>T (PTPN22)	ENSP00000435176.1:n.*949A>T
ENST00000538253.5:c.*949A>T (PTPN22)	ENSP00000439372.2:n.*949A>T
NM_001193431.1:c.*949A>T (PTPN22)	NP_001180360.1:n.*949A>T
NM_001193431.2:c.*949A>T (PTPN22)	NP_001180360.1:n.*949A>T
NM_001308297.1:c.*949A>T (PTPN22)	NP_001295226.1:n.*949A>T
NM_012411.4:c.*949A>T (PTPN22)	NP_036543.4:n.*949A>T
NM_012411.5:c.*949A>T (PTPN22)	NP_036543.4:n.*949A>T
NM_015967.5:c.*949A>T (PTPN22)	NP_057051.3:n.*949A>T
NM_015967.6:c.*949A>T (PTPN22)	NP_057051.3:n.*949A>T
NR_125965.1:n.215-431T>A (AP4B1-AS1)
XM_011541221.1:c.*949A>T (PTPN22)	XP_011539523.1:n.*949A>T
XM_011541222.1:c.*1020A>T (PTPN22)	XP_011539524.1:n.*1020A>T
XM_011541224.1:c.*949A>T (PTPN22)	XP_011539526.1:n.*949A>T
XM_011541225.1:c.*1020A>T (PTPN22)	XP_011539527.1:n.*1020A>T
XM_011541225.2:c.*1020A>T (PTPN22)	XP_011539527.1:n.*1020A>T
XM_017001005.2:c.*949A>T (PTPN22)	XP_016856494.1:n.*949A>T
NM_015967.7:c.*949A>T (PTPN22)	NP_057051.3:n.*949A>T
NM_015967.8:c.*949A>T (PTPN22) MANE Select	NP_057051.4:n.*949A>T