Canonical Allele Identifier: CA413242302

Gene: SMC1A

Linked Data

• dbSNP Id: rs1312716558
• gnomAD v2: X-53407620-C-T
• gnomAD v4: X-53380699-C-T
• MyVariant Identifiers: chrX:g.53407620C>T (hg19) ; chrX:g.53380699C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000023.11:g.53380699C>T , CM000685.2:g.53380699C>T	GRCh38
NC_000023.10:g.53407620C>T , CM000685.1:g.53407620C>T	GRCh37
NC_000023.9:g.53424345C>T	NCBI36
NG_006988.2:g.46972G>A , LRG_773:g.46972G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000322213.9:c.3539G>A MANE Select	ENSP00000323421.3:p.Cys1180Tyr
ENST00000674590.1:c.2771G>A	ENSP00000502626.1:p.Cys924Tyr
ENST00000675504.1:c.3473G>A	ENSP00000502524.1:p.Cys1158Tyr
ENST00000322213.8:c.3539G>A	ENSP00000323421.3:p.Cys1180Tyr
ENST00000375340.10:c.3473G>A	ENSP00000364489.7:p.Cys1158Tyr
ENST00000470241.2:c.759G>A
NM_001281463.1:c.3473G>A , LRG_773t1:c.3473G>A	NP_001268392.1:p.Cys1158Tyr
NM_006306.3:c.3539G>A , LRG_773t2:c.3539G>A	NP_006297.2:p.Cys1180Tyr
NM_006306.4:c.3539G>A MANE Select	NP_006297.2:p.Cys1180Tyr