Canonical Allele Identifier: CA398629303

Gene: SHMT1

Linked Data

• MyVariant Identifiers: chr17:g.18232107C>A (hg19) ; chr17:g.18328793C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000017.11:g.18328793C>A , CM000679.2:g.18328793C>A	GRCh38
NC_000017.10:g.18232107C>A , CM000679.1:g.18232107C>A	GRCh37
NC_000017.9:g.18172832C>A	NCBI36
NG_017111.1:g.39750G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000583780.2:c.1409G>T	ENSP00000462041.2:p.Ser470Ile
ENST00000316694.8:c.1409G>T MANE Select	ENSP00000318868.3:p.Ser470Ile
ENST00000316694.7:c.1409G>T	ENSP00000318868.3:p.Ser470Ile
ENST00000352886.10:c.995G>T	ENSP00000345881.7:p.Ser332Ile
ENST00000354098.7:c.1292G>T	ENSP00000318805.3:p.Ser431Ile
ENST00000395684.5:n.1732G>T
ENST00000580002.5:c.*906G>T	ENSP00000462043.1:n.*906G>T
NM_001281786.1:c.995G>T	NP_001268715.1:p.Ser332Ile
NM_004169.4:c.1409G>T	NP_004160.3:p.Ser470Ile
NM_148918.2:c.1292G>T	NP_683718.1:p.Ser431Ile
XM_005256767.2:c.1409G>T	XP_005256824.1:p.Ser470Ile
XM_011523992.1:c.1169G>T	XP_011522294.1:p.Ser390Ile
XM_005256767.3:c.1409G>T	XP_005256824.1:p.Ser470Ile
XM_011523992.3:c.1169G>T	XP_011522294.1:p.Ser390Ile
XM_017024957.1:c.1409G>T	XP_016880446.1:p.Ser470Ile
XM_017024958.1:c.1292G>T	XP_016880447.1:p.Ser431Ile
XM_024450887.1:c.1169G>T	XP_024306655.1:p.Ser390Ile
XM_024450888.1:c.995G>T	XP_024306656.1:p.Ser332Ile
XM_024450889.1:c.878G>T	XP_024306657.1:p.Ser293Ile
XM_024450890.1:c.755G>T	XP_024306658.1:p.Ser252Ile
NM_004169.5:c.1409G>T MANE Select	NP_004160.3:p.Ser470Ile
NM_001281786.2:c.995G>T	NP_001268715.1:p.Ser332Ile
NM_148918.3:c.1292G>T	NP_683718.1:p.Ser431Ile