Canonical Allele Identifier: CA395344780
Gene: CLN3 HGNC NCBI

Linked Data

ClinVar Variation Id: 1386981
ClinVar RCV Id: RCV001881722
dbSNP Id: rs374217931

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28484047C>G , CM000678.2:g.28484047C>G GRCh38
NC_000016.9:g.28495368C>G , CM000678.1:g.28495368C>G GRCh37
NC_000016.8:g.28402869C>G NCBI36
NG_008654.2:g.13256G>C , LRG_689:g.13256G>C

Transcript Alleles

HGVS Amino-acid change
ENST00000333496.14:c.677G>C ENSP00000329171.9:p.Arg226Pro
ENST00000355477.10:c.605G>C ENSP00000347660.7:p.Arg202Pro
ENST00000357857.14:c.587G>C ENSP00000350523.9:p.Arg196Pro
ENST00000359984.12:c.749G>C ENSP00000353073.9:p.Arg250Pro
ENST00000360019.8:c.677G>C ENSP00000353116.3:p.Arg226Pro
ENST00000395653.9:c.290G>C ENSP00000379014.5:p.Arg97Pro
ENST00000561689.6:n.1034G>C
ENST00000564091.6:c.89G>C ENSP00000454466.2:p.Arg30Pro
ENST00000565316.6:c.749G>C ENSP00000456117.1:p.Arg250Pro
ENST00000565778.6:c.380G>C ENSP00000458015.1:p.Arg127Pro
ENST00000566083.6:n.1207G>C
ENST00000566824.6:n.729G>C
ENST00000567963.6:c.587G>C ENSP00000455387.2:p.Arg196Pro
ENST00000568076.6:n.876G>C
ENST00000568422.6:c.532G>C ENSP00000455549.2:p.Gly178Arg
ENST00000568452.6:n.852G>C
ENST00000568472.6:n.625G>C
ENST00000568497.6:c.-221G>C ENSP00000456414.2:n.-221G>C
ENST00000568558.6:c.452G>C ENSP00000455603.2:p.Arg151Pro
ENST00000569430.7:c.749G>C ENSP00000454229.1:p.Arg250Pro
ENST00000628023.3:c.*45G>C ENSP00000486178.1:n.*45G>C
ENST00000635861.1:c.*273G>C ENSP00000490034.1:n.*273G>C
ENST00000635887.1:c.749G>C ENSP00000490709.1:p.Arg250Pro
ENST00000635958.1:n.860G>C
ENST00000635973.1:c.500G>C ENSP00000490363.1:p.Arg167Pro
ENST00000636017.1:c.*273G>C ENSP00000490538.1:n.*273G>C
ENST00000636078.1:n.791G>C
ENST00000636147.2:c.749G>C MANE Select ENSP00000490105.1:p.Arg250Pro
ENST00000636172.1:c.*273G>C ENSP00000490505.1:n.*273G>C
ENST00000636228.1:c.443G>C ENSP00000489627.1:p.Arg148Pro
ENST00000636351.1:n.469G>C
ENST00000636503.1:c.749G>C ENSP00000489824.1:p.Arg250Pro
ENST00000636685.1:n.256G>C
ENST00000636766.1:c.749G>C ENSP00000489841.1:p.Arg250Pro
ENST00000636839.1:n.901G>C
ENST00000636853.1:n.1664G>C
ENST00000636866.1:c.749G>C ENSP00000490880.1:p.Arg250Pro
ENST00000636907.1:n.900G>C
ENST00000636977.1:n.1817G>C
ENST00000637050.1:n.836G>C
ENST00000637100.1:c.749G>C ENSP00000490394.1:p.Arg250Pro
ENST00000637107.1:c.*273G>C ENSP00000490248.1:n.*273G>C
ENST00000637184.1:c.749G>C ENSP00000489952.1:p.Arg250Pro
ENST00000637299.1:c.*558G>C ENSP00000489823.1:n.*558G>C
ENST00000637376.1:c.749G>C ENSP00000490758.1:p.Arg250Pro
ENST00000637578.1:c.*273G>C ENSP00000490206.1:n.*273G>C
ENST00000637699.1:c.532G>C ENSP00000490049.1:p.Gly178Arg
ENST00000637745.1:c.88G>C
ENST00000637871.1:c.*273G>C ENSP00000490670.1:n.*273G>C
ENST00000333496.13:c.677G>C ENSP00000329171.9:p.Arg226Pro
ENST00000355477.9:c.532G>C ENSP00000347660.6:p.Gly178Arg
ENST00000357806.11:c.452G>C ENSP00000350457.7:p.Arg151Pro
ENST00000357857.13:c.587G>C ENSP00000350523.9:p.Arg196Pro
ENST00000359984.11:c.443G>C ENSP00000353073.8:p.Arg148Pro
ENST00000360019.6:c.749G>C ENSP00000353116.2:p.Arg250Pro
ENST00000395653.8:c.449G>C ENSP00000379014.4:p.Arg150Pro
ENST00000561689.5:n.590G>C
ENST00000563874.5:n.2103G>C
ENST00000564574.5:n.797G>C
ENST00000565047.1:n.343G>C
ENST00000565140.5:c.532G>C ENSP00000455342.1:p.Gly178Arg
ENST00000565316.5:c.749G>C ENSP00000456117.1:p.Arg250Pro
ENST00000565688.5:c.500G>C ENSP00000456122.1:p.Arg167Pro
ENST00000565778.5:c.380G>C ENSP00000458015.1:p.Arg127Pro
ENST00000566057.5:c.363G>C ENSP00000456693.1:n.363G>C
ENST00000566083.5:n.980G>C
ENST00000566824.5:n.798G>C
ENST00000567495.5:c.532G>C ENSP00000456013.1:p.Gly178Arg
ENST00000567963.5:c.749G>C ENSP00000455387.1:p.Arg250Pro
ENST00000568076.5:n.532G>C
ENST00000568224.4:c.515G>C ENSP00000454253.1:p.Arg172Pro
ENST00000568422.5:c.385G>C ENSP00000455549.1:p.Gly129Arg
ENST00000568452.5:n.749G>C
ENST00000568472.5:n.229G>C
ENST00000568497.5:c.*45G>C ENSP00000456414.1:n.*45G>C
ENST00000568558.5:c.290G>C ENSP00000455603.1:p.Arg97Pro
ENST00000569030.5:c.461-1375G>C ENSP00000454680.1:n.461-1375G>C
ENST00000569430.5:c.749G>C ENSP00000454229.1:p.Arg250Pro
ENST00000628023.2:c.*45G>C ENSP00000486178.1:n.*45G>C
ENST00000631023.2:c.749G>C ENSP00000486616.1:p.Arg250Pro
NM_000086.2:c.749G>C , LRG_689t1:c.749G>C NP_000077.1:p.Arg250Pro
NM_001042432.1:c.749G>C , LRG_689t2:c.749G>C NP_001035897.1:p.Arg250Pro
NM_001286104.1:c.677G>C NP_001273033.1:p.Arg226Pro
NM_001286105.1:c.449G>C NP_001273034.1:p.Arg150Pro
NM_001286109.1:c.515G>C NP_001273038.1:p.Arg172Pro
NM_001286110.1:c.587G>C NP_001273039.1:p.Arg196Pro
NM_001042432.2:c.749G>C MANE Select NP_001035897.1:p.Arg250Pro
NM_001286104.2:c.677G>C NP_001273033.1:p.Arg226Pro
NM_001286105.2:c.449G>C NP_001273034.1:p.Arg150Pro
NM_001286109.2:c.515G>C NP_001273038.1:p.Arg172Pro
NM_001286110.2:c.587G>C NP_001273039.1:p.Arg196Pro