Canonical Allele Identifier: CA395344719

Gene: CLN3

Linked Data

• ClinVar Variation Id: 2098119
• ClinVar RCV Id: RCV003019116
• dbSNP Id: rs1473957233
• MyVariant Identifiers: chr16:g.28495342G>A (hg19) ; chr16:g.28484021G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000016.10:g.28484021G>A , CM000678.2:g.28484021G>A	GRCh38
NC_000016.9:g.28495342G>A , CM000678.1:g.28495342G>A	GRCh37
NC_000016.8:g.28402843G>A	NCBI36
NG_008654.2:g.13282C>T , LRG_689:g.13282C>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000333496.14:c.703C>T	ENSP00000329171.9:p.Pro235Ser
ENST00000355477.10:c.631C>T	ENSP00000347660.7:p.Pro211Ser
ENST00000357857.14:c.613C>T	ENSP00000350523.9:p.Pro205Ser
ENST00000359984.12:c.775C>T	ENSP00000353073.9:p.Pro259Ser
ENST00000360019.8:c.703C>T	ENSP00000353116.3:p.Pro235Ser
ENST00000395653.9:c.316C>T	ENSP00000379014.5:p.Pro106Ser
ENST00000561689.6:n.1060C>T
ENST00000564091.6:c.115C>T	ENSP00000454466.2:p.Pro39Ser
ENST00000565316.6:c.775C>T	ENSP00000456117.1:p.Pro259Ser
ENST00000565778.6:c.406C>T	ENSP00000458015.1:p.Pro136Ser
ENST00000566083.6:n.1233C>T
ENST00000566824.6:n.755C>T
ENST00000567963.6:c.613C>T	ENSP00000455387.2:p.Pro205Ser
ENST00000568076.6:n.902C>T
ENST00000568422.6:c.*12C>T	ENSP00000455549.2:n.*12C>T
ENST00000568452.6:n.878C>T
ENST00000568472.6:n.651C>T
ENST00000568497.6:c.-195C>T	ENSP00000456414.2:n.-195C>T
ENST00000568558.6:c.478C>T	ENSP00000455603.2:p.Pro160Ser
ENST00000569430.7:c.775C>T	ENSP00000454229.1:p.Pro259Ser
ENST00000628023.3:c.*71C>T	ENSP00000486178.1:n.*71C>T
ENST00000635861.1:c.*299C>T	ENSP00000490034.1:n.*299C>T
ENST00000635887.1:c.775C>T	ENSP00000490709.1:p.Pro259Ser
ENST00000635958.1:n.886C>T
ENST00000635973.1:c.526C>T	ENSP00000490363.1:p.Pro176Ser
ENST00000636017.1:c.*299C>T	ENSP00000490538.1:n.*299C>T
ENST00000636078.1:n.817C>T
ENST00000636147.2:c.775C>T MANE Select	ENSP00000490105.1:p.Pro259Ser
ENST00000636172.1:c.*299C>T	ENSP00000490505.1:n.*299C>T
ENST00000636228.1:c.469C>T	ENSP00000489627.1:p.Pro157Ser
ENST00000636351.1:n.495C>T
ENST00000636503.1:c.775C>T	ENSP00000489824.1:p.Pro259Ser
ENST00000636685.1:n.282C>T
ENST00000636766.1:c.775C>T	ENSP00000489841.1:p.Pro259Ser
ENST00000636839.1:n.927C>T
ENST00000636853.1:n.1690C>T
ENST00000636866.1:c.775C>T	ENSP00000490880.1:p.Pro259Ser
ENST00000636907.1:n.926C>T
ENST00000636977.1:n.1843C>T
ENST00000637050.1:n.862C>T
ENST00000637100.1:c.775C>T	ENSP00000490394.1:p.Pro259Ser
ENST00000637107.1:c.*299C>T	ENSP00000490248.1:n.*299C>T
ENST00000637184.1:c.775C>T	ENSP00000489952.1:p.Pro259Ser
ENST00000637299.1:c.*584C>T	ENSP00000489823.1:n.*584C>T
ENST00000637376.1:c.775C>T	ENSP00000490758.1:p.Pro259Ser
ENST00000637578.1:c.*299C>T	ENSP00000490206.1:n.*299C>T
ENST00000637699.1:c.558C>T	ENSP00000490049.1:n.558C>T
ENST00000637745.1:c.114C>T
ENST00000637871.1:c.*299C>T	ENSP00000490670.1:n.*299C>T
ENST00000333496.13:c.703C>T	ENSP00000329171.9:p.Pro235Ser
ENST00000355477.9:c.*12C>T	ENSP00000347660.6:n.*12C>T
ENST00000357806.11:c.478C>T	ENSP00000350457.7:p.Pro160Ser
ENST00000357857.13:c.613C>T	ENSP00000350523.9:p.Pro205Ser
ENST00000359984.11:c.469C>T	ENSP00000353073.8:p.Pro157Ser
ENST00000360019.6:c.775C>T	ENSP00000353116.2:p.Pro259Ser
ENST00000395653.8:c.475C>T	ENSP00000379014.4:p.Pro159Ser
ENST00000561689.5:n.616C>T
ENST00000563874.5:n.2129C>T
ENST00000564574.5:n.823C>T
ENST00000565047.1:n.369C>T
ENST00000565140.5:c.558C>T	ENSP00000455342.1:n.558C>T
ENST00000565316.5:c.775C>T	ENSP00000456117.1:p.Pro259Ser
ENST00000565688.5:c.526C>T	ENSP00000456122.1:p.Pro176Ser
ENST00000565778.5:c.406C>T	ENSP00000458015.1:p.Pro136Ser
ENST00000566057.5:c.389C>T	ENSP00000456693.1:n.389C>T
ENST00000566083.5:n.1006C>T
ENST00000566824.5:n.824C>T
ENST00000567495.5:c.*12C>T	ENSP00000456013.1:n.*12C>T
ENST00000567963.5:c.775C>T	ENSP00000455387.1:p.Pro259Ser
ENST00000568076.5:n.558C>T
ENST00000568224.4:c.541C>T	ENSP00000454253.1:p.Pro181Ser
ENST00000568422.5:c.*12C>T	ENSP00000455549.1:n.*12C>T
ENST00000568452.5:n.775C>T
ENST00000568472.5:n.255C>T
ENST00000568497.5:c.*71C>T	ENSP00000456414.1:n.*71C>T
ENST00000568558.5:c.316C>T	ENSP00000455603.1:p.Pro106Ser
ENST00000569030.5:c.461-1349C>T	ENSP00000454680.1:n.461-1349C>T
ENST00000569430.5:c.775C>T	ENSP00000454229.1:p.Pro259Ser
ENST00000628023.2:c.*71C>T	ENSP00000486178.1:n.*71C>T
ENST00000631023.2:c.775C>T	ENSP00000486616.1:p.Pro259Ser
NM_000086.2:c.775C>T , LRG_689t1:c.775C>T	NP_000077.1:p.Pro259Ser
NM_001042432.1:c.775C>T , LRG_689t2:c.775C>T	NP_001035897.1:p.Pro259Ser
NM_001286104.1:c.703C>T	NP_001273033.1:p.Pro235Ser
NM_001286105.1:c.475C>T	NP_001273034.1:p.Pro159Ser
NM_001286109.1:c.541C>T	NP_001273038.1:p.Pro181Ser
NM_001286110.1:c.613C>T	NP_001273039.1:p.Pro205Ser
NM_001042432.2:c.775C>T MANE Select	NP_001035897.1:p.Pro259Ser
NM_001286104.2:c.703C>T	NP_001273033.1:p.Pro235Ser
NM_001286105.2:c.475C>T	NP_001273034.1:p.Pro159Ser
NM_001286109.2:c.541C>T	NP_001273038.1:p.Pro181Ser
NM_001286110.2:c.613C>T	NP_001273039.1:p.Pro205Ser