UPDATE - Protein Allele ID & Protein Sequence HGVS Requests Partially Restored
Protein allele requests are no longer disabled.
Currently, hypothetical explanatory transcript generation is not part of the response and is being investigated.
Protein allele requests are no longer disabled.
Currently, hypothetical explanatory transcript generation is not part of the response and is being investigated.
Linked Data
ClinVar Variation Id:
2083207
ClinVar RCV Id:
RCV003009059
dbSNP Id:
rs2034345648
gnomAD v4:
13-77000710-C-T
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000013.11:g.77000710C>T , CM000675.2:g.77000710C>T | GRCh38 |
| NC_000013.10:g.77574845C>T , CM000675.1:g.77574845C>T | GRCh37 |
| NC_000013.9:g.76472846C>T | NCBI36 |
| NG_009064.1:g.13787C>T , LRG_692:g.13787C>T |
Transcript Alleles
| HGVS | Amino-acid change | |
|---|---|---|
| ENST00000377453.9:c.818C>T (CLN5) MANE Select | ENSP00000366673.5:p.Thr273Ile | |
| ENST00000616833.6:c.*260C>T (CLN5) | ENSP00000479547.3:n.*260C>T | |
| ENST00000635838.1:c.174+4583C>T | ||
| ENST00000635905.1:n.566+4583C>T (CLN5) | ||
| ENST00000635915.1:c.816C>T (CLN5) | ||
| ENST00000636183.2:c.818C>T (CLN5) | ENSP00000490181.2:p.Thr273Ile | |
| ENST00000636525.2:c.565+4583C>T (CLN5) | ENSP00000490078.2:n.565+4583C>T | |
| ENST00000636681.1:c.*509C>T (CLN5) | ENSP00000489922.1:n.*509C>T | |
| ENST00000636705.1:c.654C>T (CLN5) | ||
| ENST00000636767.2:c.565+4583C>T (CLN5) | ENSP00000489855.2:n.565+4583C>T | |
| ENST00000636780.2:c.*267C>T (CLN5) | ENSP00000489809.2:n.*267C>T | |
| ENST00000637192.1:c.213+4583C>T | ||
| ENST00000637278.1:n.1144C>T (CLN5) | ||
| ENST00000637397.2:c.565+4583C>T (CLN5) | ENSP00000490422.2:n.565+4583C>T | |
| ENST00000638101.1:c.169+4583C>T | ENSP00000490535.1:n.169+4583C>T | |
| ENST00000638147.2:c.565+4583C>T | ENSP00000490953.2:n.565+4583C>T | |
| ENST00000377453.7:c.965C>T (CLN5) | ENSP00000366673.3:p.Thr322Ile | |
| ENST00000477982.2:n.1599G>A (FBXL3) | ||
| ENST00000485797.2:n.174-7759G>A (FBXL3) | ||
| ENST00000616833.4:c.818C>T (CLN5) | ENSP00000479547.1:p.Thr273Ile | |
| NM_006493.2:c.965C>T , LRG_692t1:c.965C>T (CLN5) | NP_006484.1:p.Thr322Ile | |
| XM_011534917.1:c.*267C>T (CLN5) | XP_011533219.1:n.*267C>T | |
| NM_001366624.1:c.*267C>T (CLN5) | NP_001353553.1:n.*267C>T | |
| NM_006493.3:c.818C>T (CLN5) | NP_006484.2:p.Thr273Ile | |
| XM_017020538.2:c.644-7759G>A (FBXL3) | XP_016876027.1:n.644-7759G>A | |
| NM_001366624.2:c.*267C>T (CLN5) | NP_001353553.1:n.*267C>T | |
| NM_006493.4:c.818C>T (CLN5) MANE Select | NP_006484.2:p.Thr273Ile |