Canonical Allele Identifier: CA366741621
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 2674234
ClinVar RCV Id: RCV003452430

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987220G>T , CM000669.2:g.5987220G>T GRCh38
NC_000007.13:g.6026851G>T , CM000669.1:g.6026851G>T GRCh37
NC_000007.12:g.5993377G>T NCBI36
NG_008466.1:g.26887C>A , LRG_161:g.26887C>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*941C>A ENSP00000514615.2:n.*941C>A
ENST00000699840.2:c.1542C>A ENSP00000514638.2:p.Cys514Ter
ENST00000699930.2:c.1437C>A ENSP00000514695.2:p.Cys479Ter
ENST00000406569.8:c.1545C>A ENSP00000514464.1:p.Cys515Ter
ENST00000644110.2:c.*1139C>A ENSP00000496392.2:n.*1139C>A
ENST00000699752.1:c.1389C>A ENSP00000514561.1:p.Cys463Ter
ENST00000699753.1:c.*966C>A ENSP00000514562.1:n.*966C>A
ENST00000699754.1:c.1347C>A ENSP00000514563.1:p.Cys449Ter
ENST00000699755.1:c.*944C>A ENSP00000514564.1:n.*944C>A
ENST00000699756.1:c.*1132C>A ENSP00000514565.1:n.*1132C>A
ENST00000699757.1:c.*802C>A ENSP00000514566.1:n.*802C>A
ENST00000699758.1:c.*802C>A ENSP00000514567.1:n.*802C>A
ENST00000699759.1:n.2399C>A
ENST00000699760.1:c.1227C>A ENSP00000514568.1:p.Cys409Ter
ENST00000699761.1:c.1140C>A ENSP00000514569.1:p.Cys380Ter
ENST00000699762.1:c.972C>A ENSP00000514570.1:p.Cys324Ter
ENST00000699763.1:c.*635C>A ENSP00000514571.1:n.*635C>A
ENST00000699764.1:c.1545C>A ENSP00000514572.1:p.Cys515Ter
ENST00000699765.1:c.*641C>A ENSP00000514573.1:n.*641C>A
ENST00000699766.1:c.1545C>A ENSP00000514574.1:p.Cys515Ter
ENST00000699767.1:c.1545C>A ENSP00000514575.1:p.Cys515Ter
ENST00000699768.1:c.1545C>A ENSP00000514576.1:p.Cys515Ter
ENST00000699811.1:c.1140C>A ENSP00000514614.1:p.Cys380Ter
ENST00000699813.1:n.1658C>A
ENST00000699814.1:c.1168C>A
ENST00000699815.1:c.*1076C>A ENSP00000514616.1:n.*1076C>A
ENST00000699816.1:c.*435C>A ENSP00000514617.1:n.*435C>A
ENST00000699817.1:c.*1139C>A ENSP00000514618.1:n.*1139C>A
ENST00000699818.1:c.1140C>A ENSP00000514619.1:p.Cys380Ter
ENST00000699819.1:c.*702C>A ENSP00000514620.1:n.*702C>A
ENST00000699820.1:c.1144+2580C>A ENSP00000514621.1:n.1144+2580C>A
ENST00000699821.1:c.1140C>A ENSP00000514622.1:p.Cys380Ter
ENST00000699822.1:c.*997C>A ENSP00000514623.1:n.*997C>A
ENST00000699823.1:c.1140C>A ENSP00000514624.1:p.Cys380Ter
ENST00000699824.1:c.*1048C>A ENSP00000514625.1:n.*1048C>A
ENST00000699825.1:c.984C>A ENSP00000514626.1:p.Cys328Ter
ENST00000699826.1:c.*944C>A ENSP00000514627.1:n.*944C>A
ENST00000699827.1:c.1377C>A ENSP00000514628.1:p.Cys459Ter
ENST00000699828.1:c.*635C>A ENSP00000514629.1:n.*635C>A
ENST00000699833.1:n.3317C>A
ENST00000699837.1:c.1140C>A ENSP00000514635.1:p.Cys380Ter
ENST00000699838.1:c.*1445C>A ENSP00000514636.1:n.*1445C>A
ENST00000699839.1:c.1731C>A ENSP00000514637.1:p.Cys577Ter
ENST00000699916.1:c.*802C>A ENSP00000514684.1:n.*802C>A
ENST00000699917.1:c.*994C>A ENSP00000514685.1:n.*994C>A
ENST00000699918.1:c.*1046C>A ENSP00000514686.1:n.*1046C>A
ENST00000699919.1:c.*1132C>A ENSP00000514687.1:n.*1132C>A
ENST00000699920.1:c.*1181C>A ENSP00000514688.1:n.*1181C>A
ENST00000699928.1:c.989-4229C>A ENSP00000514693.1:n.989-4229C>A
ENST00000699929.1:c.*846C>A ENSP00000514694.1:n.*846C>A
ENST00000699930.1:c.1437C>A ENSP00000514695.1:p.Cys479Ter
ENST00000699931.1:n.2973C>A
ENST00000699951.1:c.*641C>A ENSP00000514706.1:n.*641C>A
ENST00000699952.1:c.803+10106C>A ENSP00000514707.1:n.803+10106C>A
ENST00000699953.1:c.*652C>A ENSP00000514708.1:n.*652C>A
ENST00000699954.1:c.*846C>A ENSP00000514709.1:n.*846C>A
ENST00000265849.12:c.1545C>A MANE Select ENSP00000265849.7:p.Cys515Ter
ENST00000642292.1:c.1140C>A ENSP00000495524.1:p.Cys380Ter
ENST00000642456.1:c.1140C>A ENSP00000493814.1:p.Cys380Ter
ENST00000643595.1:c.*944C>A ENSP00000494497.1:n.*944C>A
ENST00000644110.1:c.1227C>A ENSP00000496392.1:p.Cys409Ter
ENST00000265849.11:c.1545C>A ENSP00000265849.7:p.Cys515Ter
ENST00000382321.5:c.804-4229C>A ENSP00000371758.4:n.804-4229C>A
ENST00000406569.7:n.1545C>A
ENST00000441476.6:c.1227C>A ENSP00000392843.2:p.Cys409Ter
ENST00000469652.1:n.63-4315C>A
NM_000535.5:c.1545C>A , LRG_161t1:c.1545C>A NP_000526.1:p.Cys515Ter
NR_003085.2:n.1627C>A
XM_006715742.2:c.1539C>A XP_006715805.1:p.Cys513Ter
XM_006715744.2:c.612C>A XP_006715807.1:p.Cys204Ter
XM_011515427.1:c.1590C>A XP_011513729.1:p.Cys530Ter
XM_011515428.1:c.1434C>A XP_011513730.1:p.Cys478Ter
XM_011515429.1:c.1227C>A XP_011513731.1:p.Cys409Ter
XM_011515430.1:c.1227C>A XP_011513732.1:p.Cys409Ter
NM_000535.6:c.1545C>A NP_000526.2:p.Cys515Ter
NM_001322003.1:c.1140C>A NP_001308932.1:p.Cys380Ter
NM_001322004.1:c.1140C>A NP_001308933.1:p.Cys380Ter
NM_001322005.1:c.1140C>A NP_001308934.1:p.Cys380Ter
NM_001322006.1:c.1389C>A NP_001308935.1:p.Cys463Ter
NM_001322007.1:c.1227C>A NP_001308936.1:p.Cys409Ter
NM_001322008.1:c.1227C>A NP_001308937.1:p.Cys409Ter
NM_001322009.1:c.1140C>A NP_001308938.1:p.Cys380Ter
NM_001322010.1:c.984C>A NP_001308939.1:p.Cys328Ter
NM_001322011.1:c.612C>A NP_001308940.1:p.Cys204Ter
NM_001322012.1:c.612C>A NP_001308941.1:p.Cys204Ter
NM_001322013.1:c.972C>A NP_001308942.1:p.Cys324Ter
NM_001322014.1:c.1545C>A NP_001308943.1:p.Cys515Ter
NM_001322015.1:c.1236C>A NP_001308944.1:p.Cys412Ter
NR_136154.1:n.1632C>A
XM_006715744.4:c.612C>A XP_006715807.1:p.Cys204Ter
XM_017012342.2:c.612C>A XP_016867831.1:p.Cys204Ter
XM_024446800.1:c.984C>A XP_024302568.1:p.Cys328Ter
NM_000535.7:c.1545C>A MANE Select NP_000526.2:p.Cys515Ter
NM_001322003.2:c.1140C>A NP_001308932.1:p.Cys380Ter
NM_001322004.2:c.1140C>A NP_001308933.1:p.Cys380Ter
NM_001322005.2:c.1140C>A NP_001308934.1:p.Cys380Ter
NM_001322006.2:c.1389C>A NP_001308935.1:p.Cys463Ter
NM_001322008.2:c.1227C>A NP_001308937.1:p.Cys409Ter
NM_001322009.2:c.1140C>A NP_001308938.1:p.Cys380Ter
NM_001322010.2:c.984C>A NP_001308939.1:p.Cys328Ter
NM_001322011.2:c.612C>A NP_001308940.1:p.Cys204Ter
NM_001322012.2:c.612C>A NP_001308941.1:p.Cys204Ter
NM_001322013.2:c.972C>A NP_001308942.1:p.Cys324Ter
NM_001322014.2:c.1545C>A NP_001308943.1:p.Cys515Ter
NM_001322015.2:c.1236C>A NP_001308944.1:p.Cys412Ter
NM_001322007.2:c.1227C>A NP_001308936.1:p.Cys409Ter