Canonical Allele Identifier: CA366741512
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 484255
dbSNP Id: rs1365849986
gnomAD v2: 7-6026798-A-G
gnomAD v3: 7-5987167-A-G
gnomAD v4: 7-5987167-A-G

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987167A>G , CM000669.2:g.5987167A>G GRCh38
NC_000007.13:g.6026798A>G , CM000669.1:g.6026798A>G GRCh37
NC_000007.12:g.5993324A>G NCBI36
NG_008466.1:g.26940T>C , LRG_161:g.26940T>C

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*994T>C ENSP00000514615.2:n.*994T>C
ENST00000699840.2:c.1595T>C ENSP00000514638.2:p.Val532Ala
ENST00000699930.2:c.1490T>C ENSP00000514695.2:p.Val497Ala
ENST00000406569.8:c.1598T>C ENSP00000514464.1:p.Val533Ala
ENST00000644110.2:c.*1192T>C ENSP00000496392.2:n.*1192T>C
ENST00000699752.1:c.1442T>C ENSP00000514561.1:p.Val481Ala
ENST00000699753.1:c.*1019T>C ENSP00000514562.1:n.*1019T>C
ENST00000699754.1:c.1400T>C ENSP00000514563.1:p.Val467Ala
ENST00000699755.1:c.*997T>C ENSP00000514564.1:n.*997T>C
ENST00000699756.1:c.*1185T>C ENSP00000514565.1:n.*1185T>C
ENST00000699757.1:c.*855T>C ENSP00000514566.1:n.*855T>C
ENST00000699758.1:c.*855T>C ENSP00000514567.1:n.*855T>C
ENST00000699759.1:n.2452T>C
ENST00000699760.1:c.1280T>C ENSP00000514568.1:p.Val427Ala
ENST00000699761.1:c.1193T>C ENSP00000514569.1:p.Val398Ala
ENST00000699762.1:c.1025T>C ENSP00000514570.1:p.Val342Ala
ENST00000699763.1:c.*688T>C ENSP00000514571.1:n.*688T>C
ENST00000699764.1:c.1554-45T>C ENSP00000514572.1:n.1554-45T>C
ENST00000699765.1:c.*694T>C ENSP00000514573.1:n.*694T>C
ENST00000699766.1:c.1598T>C ENSP00000514574.1:p.Val533Ala
ENST00000699767.1:c.1598T>C ENSP00000514575.1:p.Val533Ala
ENST00000699768.1:c.1598T>C ENSP00000514576.1:p.Val533Ala
ENST00000699811.1:c.1193T>C ENSP00000514614.1:p.Val398Ala
ENST00000699813.1:n.1711T>C
ENST00000699814.1:c.1221T>C
ENST00000699815.1:c.*1129T>C ENSP00000514616.1:n.*1129T>C
ENST00000699816.1:c.*488T>C ENSP00000514617.1:n.*488T>C
ENST00000699817.1:c.*1192T>C ENSP00000514618.1:n.*1192T>C
ENST00000699818.1:c.1193T>C ENSP00000514619.1:p.Val398Ala
ENST00000699819.1:c.*755T>C ENSP00000514620.1:n.*755T>C
ENST00000699820.1:c.1144+2633T>C ENSP00000514621.1:n.1144+2633T>C
ENST00000699821.1:c.1193T>C ENSP00000514622.1:p.Val398Ala
ENST00000699822.1:c.*1050T>C ENSP00000514623.1:n.*1050T>C
ENST00000699823.1:c.1193T>C ENSP00000514624.1:p.Val398Ala
ENST00000699824.1:c.*1101T>C ENSP00000514625.1:n.*1101T>C
ENST00000699825.1:c.1037T>C ENSP00000514626.1:p.Val346Ala
ENST00000699826.1:c.*997T>C ENSP00000514627.1:n.*997T>C
ENST00000699827.1:c.1430T>C ENSP00000514628.1:p.Val477Ala
ENST00000699828.1:c.*688T>C ENSP00000514629.1:n.*688T>C
ENST00000699833.1:n.3370T>C
ENST00000699837.1:c.1193T>C ENSP00000514635.1:p.Val398Ala
ENST00000699838.1:c.*1498T>C ENSP00000514636.1:n.*1498T>C
ENST00000699839.1:c.1784T>C ENSP00000514637.1:p.Val595Ala
ENST00000699916.1:c.*855T>C ENSP00000514684.1:n.*855T>C
ENST00000699917.1:c.*1047T>C ENSP00000514685.1:n.*1047T>C
ENST00000699918.1:c.*1099T>C ENSP00000514686.1:n.*1099T>C
ENST00000699919.1:c.*1185T>C ENSP00000514687.1:n.*1185T>C
ENST00000699920.1:c.*1234T>C ENSP00000514688.1:n.*1234T>C
ENST00000699928.1:c.989-4176T>C ENSP00000514693.1:n.989-4176T>C
ENST00000699929.1:c.*899T>C ENSP00000514694.1:n.*899T>C
ENST00000699930.1:c.1490T>C ENSP00000514695.1:p.Val497Ala
ENST00000699931.1:n.3026T>C
ENST00000699951.1:c.*694T>C ENSP00000514706.1:n.*694T>C
ENST00000699952.1:c.803+10159T>C ENSP00000514707.1:n.803+10159T>C
ENST00000699953.1:c.*705T>C ENSP00000514708.1:n.*705T>C
ENST00000699954.1:c.*899T>C ENSP00000514709.1:n.*899T>C
ENST00000265849.12:c.1598T>C MANE Select ENSP00000265849.7:p.Val533Ala
ENST00000642292.1:c.1193T>C ENSP00000495524.1:p.Val398Ala
ENST00000642456.1:c.1193T>C ENSP00000493814.1:p.Val398Ala
ENST00000643595.1:c.*997T>C ENSP00000494497.1:n.*997T>C
ENST00000644110.1:c.1280T>C ENSP00000496392.1:p.Val427Ala
ENST00000265849.11:c.1598T>C ENSP00000265849.7:p.Val533Ala
ENST00000382321.5:c.804-4176T>C ENSP00000371758.4:n.804-4176T>C
ENST00000406569.7:n.1598T>C
ENST00000441476.6:c.1280T>C ENSP00000392843.2:p.Val427Ala
ENST00000469652.1:n.63-4262T>C
NM_000535.5:c.1598T>C , LRG_161t1:c.1598T>C NP_000526.1:p.Val533Ala
NR_003085.2:n.1680T>C
XM_006715742.2:c.1592T>C XP_006715805.1:p.Val531Ala
XM_006715744.2:c.665T>C XP_006715807.1:p.Val222Ala
XM_011515427.1:c.1643T>C XP_011513729.1:p.Val548Ala
XM_011515428.1:c.1487T>C XP_011513730.1:p.Val496Ala
XM_011515429.1:c.1280T>C XP_011513731.1:p.Val427Ala
XM_011515430.1:c.1280T>C XP_011513732.1:p.Val427Ala
NM_000535.6:c.1598T>C NP_000526.2:p.Val533Ala
NM_001322003.1:c.1193T>C NP_001308932.1:p.Val398Ala
NM_001322004.1:c.1193T>C NP_001308933.1:p.Val398Ala
NM_001322005.1:c.1193T>C NP_001308934.1:p.Val398Ala
NM_001322006.1:c.1442T>C NP_001308935.1:p.Val481Ala
NM_001322007.1:c.1280T>C NP_001308936.1:p.Val427Ala
NM_001322008.1:c.1280T>C NP_001308937.1:p.Val427Ala
NM_001322009.1:c.1193T>C NP_001308938.1:p.Val398Ala
NM_001322010.1:c.1037T>C NP_001308939.1:p.Val346Ala
NM_001322011.1:c.665T>C NP_001308940.1:p.Val222Ala
NM_001322012.1:c.665T>C NP_001308941.1:p.Val222Ala
NM_001322013.1:c.1025T>C NP_001308942.1:p.Val342Ala
NM_001322014.1:c.1598T>C NP_001308943.1:p.Val533Ala
NM_001322015.1:c.1289T>C NP_001308944.1:p.Val430Ala
NR_136154.1:n.1685T>C
XM_006715744.4:c.665T>C XP_006715807.1:p.Val222Ala
XM_017012342.2:c.665T>C XP_016867831.1:p.Val222Ala
XM_024446800.1:c.1037T>C XP_024302568.1:p.Val346Ala
NM_000535.7:c.1598T>C MANE Select NP_000526.2:p.Val533Ala
NM_001322003.2:c.1193T>C NP_001308932.1:p.Val398Ala
NM_001322004.2:c.1193T>C NP_001308933.1:p.Val398Ala
NM_001322005.2:c.1193T>C NP_001308934.1:p.Val398Ala
NM_001322006.2:c.1442T>C NP_001308935.1:p.Val481Ala
NM_001322008.2:c.1280T>C NP_001308937.1:p.Val427Ala
NM_001322009.2:c.1193T>C NP_001308938.1:p.Val398Ala
NM_001322010.2:c.1037T>C NP_001308939.1:p.Val346Ala
NM_001322011.2:c.665T>C NP_001308940.1:p.Val222Ala
NM_001322012.2:c.665T>C NP_001308941.1:p.Val222Ala
NM_001322013.2:c.1025T>C NP_001308942.1:p.Val342Ala
NM_001322014.2:c.1598T>C NP_001308943.1:p.Val533Ala
NM_001322015.2:c.1289T>C NP_001308944.1:p.Val430Ala
NM_001322007.2:c.1280T>C NP_001308936.1:p.Val427Ala