Canonical Allele Identifier: CA366739727
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 2767125
ClinVar RCV Id: RCV003594492
dbSNP Id: rs1782971627

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986952C>G , CM000669.2:g.5986952C>G GRCh38
NC_000007.13:g.6026583C>G , CM000669.1:g.6026583C>G GRCh37
NC_000007.12:g.5993109C>G NCBI36
NG_008466.1:g.27155G>C , LRG_161:g.27155G>C

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1209G>C ENSP00000514615.2:n.*1209G>C
ENST00000699840.2:c.1810G>C ENSP00000514638.2:p.Val604Leu
ENST00000699930.2:c.1705G>C ENSP00000514695.2:p.Val569Leu
ENST00000406569.8:c.1678+135G>C ENSP00000514464.1:n.1678+135G>C
ENST00000644110.2:c.*1407G>C ENSP00000496392.2:n.*1407G>C
ENST00000699752.1:c.1657G>C ENSP00000514561.1:p.Val553Leu
ENST00000699753.1:c.*1234G>C ENSP00000514562.1:n.*1234G>C
ENST00000699754.1:c.1615G>C ENSP00000514563.1:p.Val539Leu
ENST00000699755.1:c.*1212G>C ENSP00000514564.1:n.*1212G>C
ENST00000699756.1:c.*1400G>C ENSP00000514565.1:n.*1400G>C
ENST00000699757.1:c.*1070G>C ENSP00000514566.1:n.*1070G>C
ENST00000699758.1:c.*1070G>C ENSP00000514567.1:n.*1070G>C
ENST00000699759.1:n.2667G>C
ENST00000699760.1:c.1495G>C ENSP00000514568.1:p.Val499Leu
ENST00000699761.1:c.1408G>C ENSP00000514569.1:p.Val470Leu
ENST00000699762.1:c.1240G>C ENSP00000514570.1:p.Val414Leu
ENST00000699763.1:c.*903G>C ENSP00000514571.1:n.*903G>C
ENST00000699764.1:c.*131G>C ENSP00000514572.1:n.*131G>C
ENST00000699765.1:c.*909G>C ENSP00000514573.1:n.*909G>C
ENST00000699766.1:c.1813G>C ENSP00000514574.1:p.Val605Leu
ENST00000699767.1:c.1813G>C ENSP00000514575.1:p.Val605Leu
ENST00000699768.1:c.1813G>C ENSP00000514576.1:p.Val605Leu
ENST00000699811.1:c.1408G>C ENSP00000514614.1:p.Val470Leu
ENST00000699813.1:n.1926G>C
ENST00000699814.1:c.1436G>C
ENST00000699815.1:c.*1344G>C ENSP00000514616.1:n.*1344G>C
ENST00000699816.1:c.*703G>C ENSP00000514617.1:n.*703G>C
ENST00000699817.1:c.*1407G>C ENSP00000514618.1:n.*1407G>C
ENST00000699818.1:c.1408G>C ENSP00000514619.1:p.Val470Leu
ENST00000699819.1:c.*970G>C ENSP00000514620.1:n.*970G>C
ENST00000699820.1:c.1144+2848G>C ENSP00000514621.1:n.1144+2848G>C
ENST00000699821.1:c.1408G>C ENSP00000514622.1:p.Val470Leu
ENST00000699822.1:c.*1265G>C ENSP00000514623.1:n.*1265G>C
ENST00000699823.1:c.1408G>C ENSP00000514624.1:p.Val470Leu
ENST00000699824.1:c.*1316G>C ENSP00000514625.1:n.*1316G>C
ENST00000699825.1:c.1252G>C ENSP00000514626.1:p.Val418Leu
ENST00000699826.1:c.*1212G>C ENSP00000514627.1:n.*1212G>C
ENST00000699827.1:c.1645G>C ENSP00000514628.1:p.Val549Leu
ENST00000699828.1:c.*903G>C ENSP00000514629.1:n.*903G>C
ENST00000699833.1:n.3585G>C
ENST00000699837.1:c.1408G>C ENSP00000514635.1:p.Val470Leu
ENST00000699838.1:c.*1713G>C ENSP00000514636.1:n.*1713G>C
ENST00000699839.1:c.1999G>C ENSP00000514637.1:p.Val667Leu
ENST00000699916.1:c.*1070G>C ENSP00000514684.1:n.*1070G>C
ENST00000699917.1:c.*1262G>C ENSP00000514685.1:n.*1262G>C
ENST00000699918.1:c.*1314G>C ENSP00000514686.1:n.*1314G>C
ENST00000699919.1:c.*1400G>C ENSP00000514687.1:n.*1400G>C
ENST00000699920.1:c.*1449G>C ENSP00000514688.1:n.*1449G>C
ENST00000699928.1:c.989-3961G>C ENSP00000514693.1:n.989-3961G>C
ENST00000699929.1:c.*1114G>C ENSP00000514694.1:n.*1114G>C
ENST00000699930.1:c.1705G>C ENSP00000514695.1:p.Val569Leu
ENST00000699931.1:n.3241G>C
ENST00000699951.1:c.*909G>C ENSP00000514706.1:n.*909G>C
ENST00000699952.1:c.803+10374G>C ENSP00000514707.1:n.803+10374G>C
ENST00000699953.1:c.*920G>C ENSP00000514708.1:n.*920G>C
ENST00000699954.1:c.*1114G>C ENSP00000514709.1:n.*1114G>C
ENST00000265849.12:c.1813G>C MANE Select ENSP00000265849.7:p.Val605Leu
ENST00000642292.1:c.1408G>C ENSP00000495524.1:p.Val470Leu
ENST00000642456.1:c.1408G>C ENSP00000493814.1:p.Val470Leu
ENST00000643595.1:c.*1212G>C ENSP00000494497.1:n.*1212G>C
ENST00000644110.1:c.1495G>C ENSP00000496392.1:p.Val499Leu
ENST00000265849.11:c.1813G>C ENSP00000265849.7:p.Val605Leu
ENST00000382321.5:c.804-3961G>C ENSP00000371758.4:n.804-3961G>C
ENST00000406569.7:n.1678+135G>C
ENST00000441476.6:c.1495G>C ENSP00000392843.2:p.Val499Leu
ENST00000469652.1:n.63-4047G>C
NM_000535.5:c.1813G>C , LRG_161t1:c.1813G>C NP_000526.1:p.Val605Leu
NR_003085.2:n.1895G>C
XM_006715742.2:c.1807G>C XP_006715805.1:p.Val603Leu
XM_006715744.2:c.880G>C XP_006715807.1:p.Val294Leu
XM_011515427.1:c.1858G>C XP_011513729.1:p.Val620Leu
XM_011515428.1:c.1702G>C XP_011513730.1:p.Val568Leu
XM_011515429.1:c.1495G>C XP_011513731.1:p.Val499Leu
XM_011515430.1:c.1495G>C XP_011513732.1:p.Val499Leu
NM_000535.6:c.1813G>C NP_000526.2:p.Val605Leu
NM_001322003.1:c.1408G>C NP_001308932.1:p.Val470Leu
NM_001322004.1:c.1408G>C NP_001308933.1:p.Val470Leu
NM_001322005.1:c.1408G>C NP_001308934.1:p.Val470Leu
NM_001322006.1:c.1657G>C NP_001308935.1:p.Val553Leu
NM_001322007.1:c.1495G>C NP_001308936.1:p.Val499Leu
NM_001322008.1:c.1495G>C NP_001308937.1:p.Val499Leu
NM_001322009.1:c.1408G>C NP_001308938.1:p.Val470Leu
NM_001322010.1:c.1252G>C NP_001308939.1:p.Val418Leu
NM_001322011.1:c.880G>C NP_001308940.1:p.Val294Leu
NM_001322012.1:c.880G>C NP_001308941.1:p.Val294Leu
NM_001322013.1:c.1240G>C NP_001308942.1:p.Val414Leu
NM_001322014.1:c.1813G>C NP_001308943.1:p.Val605Leu
NM_001322015.1:c.1504G>C NP_001308944.1:p.Val502Leu
NR_136154.1:n.1900G>C
XM_006715744.4:c.880G>C XP_006715807.1:p.Val294Leu
XM_017012342.2:c.880G>C XP_016867831.1:p.Val294Leu
XM_024446800.1:c.1252G>C XP_024302568.1:p.Val418Leu
NM_000535.7:c.1813G>C MANE Select NP_000526.2:p.Val605Leu
NM_001322003.2:c.1408G>C NP_001308932.1:p.Val470Leu
NM_001322004.2:c.1408G>C NP_001308933.1:p.Val470Leu
NM_001322005.2:c.1408G>C NP_001308934.1:p.Val470Leu
NM_001322006.2:c.1657G>C NP_001308935.1:p.Val553Leu
NM_001322008.2:c.1495G>C NP_001308937.1:p.Val499Leu
NM_001322009.2:c.1408G>C NP_001308938.1:p.Val470Leu
NM_001322010.2:c.1252G>C NP_001308939.1:p.Val418Leu
NM_001322011.2:c.880G>C NP_001308940.1:p.Val294Leu
NM_001322012.2:c.880G>C NP_001308941.1:p.Val294Leu
NM_001322013.2:c.1240G>C NP_001308942.1:p.Val414Leu
NM_001322014.2:c.1813G>C NP_001308943.1:p.Val605Leu
NM_001322015.2:c.1504G>C NP_001308944.1:p.Val502Leu
NM_001322007.2:c.1495G>C NP_001308936.1:p.Val499Leu