Canonical Allele Identifier: CA366738860

Gene: PMS2

Linked Data

• MyVariant Identifiers: chr7:g.6026393A>G (hg19) ; chr7:g.5986762A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5986762A>G , CM000669.2:g.5986762A>G	GRCh38
NC_000007.13:g.6026393A>G , CM000669.1:g.6026393A>G	GRCh37
NC_000007.12:g.5992919A>G	NCBI36
NG_008466.1:g.27345T>C , LRG_161:g.27345T>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000699814.2:c.*1399T>C	ENSP00000514615.2:n.*1399T>C
ENST00000699840.2:c.2000T>C	ENSP00000514638.2:p.Ile667Thr
ENST00000699930.2:c.1895T>C	ENSP00000514695.2:p.Ile632Thr
ENST00000406569.8:c.1678+325T>C	ENSP00000514464.1:n.1678+325T>C
ENST00000644110.2:c.*1597T>C	ENSP00000496392.2:n.*1597T>C
ENST00000699752.1:c.1847T>C	ENSP00000514561.1:p.Ile616Thr
ENST00000699753.1:c.*1424T>C	ENSP00000514562.1:n.*1424T>C
ENST00000699754.1:c.1805T>C	ENSP00000514563.1:p.Ile602Thr
ENST00000699755.1:c.*1402T>C	ENSP00000514564.1:n.*1402T>C
ENST00000699756.1:c.*1590T>C	ENSP00000514565.1:n.*1590T>C
ENST00000699757.1:c.*1260T>C	ENSP00000514566.1:n.*1260T>C
ENST00000699758.1:c.*1260T>C	ENSP00000514567.1:n.*1260T>C
ENST00000699759.1:n.2857T>C
ENST00000699760.1:c.1685T>C	ENSP00000514568.1:p.Ile562Thr
ENST00000699761.1:c.1598T>C	ENSP00000514569.1:p.Ile533Thr
ENST00000699762.1:c.1430T>C	ENSP00000514570.1:p.Ile477Thr
ENST00000699763.1:c.*1093T>C	ENSP00000514571.1:n.*1093T>C
ENST00000699764.1:c.*321T>C	ENSP00000514572.1:n.*321T>C
ENST00000699765.1:c.*1099T>C	ENSP00000514573.1:n.*1099T>C
ENST00000699766.1:c.2003T>C	ENSP00000514574.1:p.Ile668Thr
ENST00000699767.1:c.2003T>C	ENSP00000514575.1:p.Ile668Thr
ENST00000699768.1:c.2003T>C	ENSP00000514576.1:p.Ile668Thr
ENST00000699811.1:c.1598T>C	ENSP00000514614.1:p.Ile533Thr
ENST00000699813.1:n.2116T>C
ENST00000699814.1:c.1626T>C
ENST00000699815.1:c.*1534T>C	ENSP00000514616.1:n.*1534T>C
ENST00000699816.1:c.*893T>C	ENSP00000514617.1:n.*893T>C
ENST00000699817.1:c.*1597T>C	ENSP00000514618.1:n.*1597T>C
ENST00000699818.1:c.1598T>C	ENSP00000514619.1:p.Ile533Thr
ENST00000699819.1:c.*1160T>C	ENSP00000514620.1:n.*1160T>C
ENST00000699820.1:c.1144+3038T>C	ENSP00000514621.1:n.1144+3038T>C
ENST00000699821.1:c.1598T>C	ENSP00000514622.1:p.Ile533Thr
ENST00000699822.1:c.*1455T>C	ENSP00000514623.1:n.*1455T>C
ENST00000699823.1:c.1598T>C	ENSP00000514624.1:p.Ile533Thr
ENST00000699824.1:c.*1506T>C	ENSP00000514625.1:n.*1506T>C
ENST00000699825.1:c.1442T>C	ENSP00000514626.1:p.Ile481Thr
ENST00000699826.1:c.*1402T>C	ENSP00000514627.1:n.*1402T>C
ENST00000699827.1:c.1835T>C	ENSP00000514628.1:p.Ile612Thr
ENST00000699828.1:c.*1093T>C	ENSP00000514629.1:n.*1093T>C
ENST00000699833.1:n.3775T>C
ENST00000699837.1:c.1598T>C	ENSP00000514635.1:p.Ile533Thr
ENST00000699838.1:c.*1903T>C	ENSP00000514636.1:n.*1903T>C
ENST00000699839.1:c.2189T>C	ENSP00000514637.1:p.Ile730Thr
ENST00000699916.1:c.*1260T>C	ENSP00000514684.1:n.*1260T>C
ENST00000699917.1:c.*1452T>C	ENSP00000514685.1:n.*1452T>C
ENST00000699918.1:c.*1504T>C	ENSP00000514686.1:n.*1504T>C
ENST00000699919.1:c.*1590T>C	ENSP00000514687.1:n.*1590T>C
ENST00000699920.1:c.*1639T>C	ENSP00000514688.1:n.*1639T>C
ENST00000699928.1:c.989-3771T>C	ENSP00000514693.1:n.989-3771T>C
ENST00000699951.1:c.*1099T>C	ENSP00000514706.1:n.*1099T>C
ENST00000699952.1:c.803+10564T>C	ENSP00000514707.1:n.803+10564T>C
ENST00000265849.12:c.2003T>C MANE Select	ENSP00000265849.7:p.Ile668Thr
ENST00000642292.1:c.1598T>C	ENSP00000495524.1:p.Ile533Thr
ENST00000642456.1:c.1598T>C	ENSP00000493814.1:p.Ile533Thr
ENST00000643595.1:c.*1402T>C	ENSP00000494497.1:n.*1402T>C
ENST00000644110.1:c.1685T>C	ENSP00000496392.1:p.Ile562Thr
ENST00000265849.11:c.2003T>C	ENSP00000265849.7:p.Ile668Thr
ENST00000382321.5:c.804-3771T>C	ENSP00000371758.4:n.804-3771T>C
ENST00000406569.7:n.1678+325T>C
ENST00000441476.6:c.1685T>C	ENSP00000392843.2:p.Ile562Thr
ENST00000469652.1:n.63-3857T>C
NM_000535.5:c.2003T>C , LRG_161t1:c.2003T>C	NP_000526.1:p.Ile668Thr
NR_003085.2:n.2085T>C
XM_006715742.2:c.1997T>C	XP_006715805.1:p.Ile666Thr
XM_006715744.2:c.1070T>C	XP_006715807.1:p.Ile357Thr
XM_011515427.1:c.2048T>C	XP_011513729.1:p.Ile683Thr
XM_011515428.1:c.1892T>C	XP_011513730.1:p.Ile631Thr
XM_011515429.1:c.1685T>C	XP_011513731.1:p.Ile562Thr
XM_011515430.1:c.1685T>C	XP_011513732.1:p.Ile562Thr
NM_000535.6:c.2003T>C	NP_000526.2:p.Ile668Thr
NM_001322003.1:c.1598T>C	NP_001308932.1:p.Ile533Thr
NM_001322004.1:c.1598T>C	NP_001308933.1:p.Ile533Thr
NM_001322005.1:c.1598T>C	NP_001308934.1:p.Ile533Thr
NM_001322006.1:c.1847T>C	NP_001308935.1:p.Ile616Thr
NM_001322007.1:c.1685T>C	NP_001308936.1:p.Ile562Thr
NM_001322008.1:c.1685T>C	NP_001308937.1:p.Ile562Thr
NM_001322009.1:c.1598T>C	NP_001308938.1:p.Ile533Thr
NM_001322010.1:c.1442T>C	NP_001308939.1:p.Ile481Thr
NM_001322011.1:c.1070T>C	NP_001308940.1:p.Ile357Thr
NM_001322012.1:c.1070T>C	NP_001308941.1:p.Ile357Thr
NM_001322013.1:c.1430T>C	NP_001308942.1:p.Ile477Thr
NM_001322014.1:c.2003T>C	NP_001308943.1:p.Ile668Thr
NM_001322015.1:c.1694T>C	NP_001308944.1:p.Ile565Thr
NR_136154.1:n.2090T>C
XM_006715744.4:c.1070T>C	XP_006715807.1:p.Ile357Thr
XM_017012342.2:c.1070T>C	XP_016867831.1:p.Ile357Thr
XM_024446800.1:c.1442T>C	XP_024302568.1:p.Ile481Thr
NM_000535.7:c.2003T>C MANE Select	NP_000526.2:p.Ile668Thr
NM_001322003.2:c.1598T>C	NP_001308932.1:p.Ile533Thr
NM_001322004.2:c.1598T>C	NP_001308933.1:p.Ile533Thr
NM_001322005.2:c.1598T>C	NP_001308934.1:p.Ile533Thr
NM_001322006.2:c.1847T>C	NP_001308935.1:p.Ile616Thr
NM_001322008.2:c.1685T>C	NP_001308937.1:p.Ile562Thr
NM_001322009.2:c.1598T>C	NP_001308938.1:p.Ile533Thr
NM_001322010.2:c.1442T>C	NP_001308939.1:p.Ile481Thr
NM_001322011.2:c.1070T>C	NP_001308940.1:p.Ile357Thr
NM_001322012.2:c.1070T>C	NP_001308941.1:p.Ile357Thr
NM_001322013.2:c.1430T>C	NP_001308942.1:p.Ile477Thr
NM_001322014.2:c.2003T>C	NP_001308943.1:p.Ile668Thr
NM_001322015.2:c.1694T>C	NP_001308944.1:p.Ile565Thr
NM_001322007.2:c.1685T>C	NP_001308936.1:p.Ile562Thr