Canonical Allele Identifier: CA352143860

Gene: SCN5A

Linked Data

• MyVariant Identifiers: chr3:g.38595905A>T (hg19) ; chr3:g.38554414A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.38554414A>T , CM000665.2:g.38554414A>T	GRCh38
NC_000003.11:g.38595905A>T , CM000665.1:g.38595905A>T	GRCh37
NC_000003.10:g.38570909A>T	NCBI36
NG_008934.1:g.100259T>A , LRG_289:g.100259T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000327956.7:c.4675T>A	ENSP00000333674.7:p.Leu1559Met
ENST00000333535.9:c.4678T>A	ENSP00000328968.4:p.Leu1560Met
ENST00000413689.6:c.4678T>A MANE Plus Clinical	ENSP00000410257.1:p.Leu1560Met
ENST00000423572.7:c.4675T>A MANE Select	ENSP00000398266.2:p.Leu1559Met
ENST00000333535.8:c.4678T>A	ENSP00000328968.4:p.Leu1560Met
ENST00000413689.5:c.4678T>A	ENSP00000410257.1:p.Leu1560Met
ENST00000414099.6:c.4624T>A	ENSP00000398962.2:p.Leu1542Met
ENST00000423572.6:c.4675T>A	ENSP00000398266.2:p.Leu1559Met
ENST00000425664.5:c.4624T>A	ENSP00000416634.1:p.Leu1542Met
ENST00000449557.6:c.4516T>A	ENSP00000413996.2:p.Leu1506Met
ENST00000450102.6:c.4516T>A	ENSP00000403355.2:p.Leu1506Met
ENST00000451551.6:c.4516T>A	ENSP00000388797.2:p.Leu1506Met
ENST00000455624.6:c.4675T>A	ENSP00000399524.2:p.Leu1559Met
ENST00000464652.1:n.136T>A
NM_000335.4:c.4675T>A , LRG_289t2:c.4675T>A	NP_000326.2:p.Leu1559Met
NM_001099404.1:c.4678T>A , LRG_289t3:c.4678T>A	NP_001092874.1:p.Leu1560Met
NM_001099405.1:c.4624T>A	NP_001092875.1:p.Leu1542Met
NM_001160160.1:c.4675T>A	NP_001153632.1:p.Leu1559Met
NM_001160161.1:c.4516T>A	NP_001153633.1:p.Leu1506Met
NM_198056.2:c.4678T>A , LRG_289t1:c.4678T>A	NP_932173.1:p.Leu1560Met
XM_006713282.2:c.4678T>A	XP_006713345.1:p.Leu1560Met
XM_011533991.1:c.4675T>A	XP_011532293.1:p.Leu1559Met
XM_011533992.1:c.4549T>A	XP_011532294.1:p.Leu1517Met
NM_001354701.1:c.4621T>A	NP_001341630.1:p.Leu1541Met
XM_011533991.2:c.4675T>A	XP_011532293.1:p.Leu1559Met
XM_017007017.1:c.4516T>A	XP_016862506.1:p.Leu1506Met
NM_000335.5:c.4675T>A MANE Select	NP_000326.2:p.Leu1559Met
NM_001160160.2:c.4675T>A	NP_001153632.1:p.Leu1559Met
NM_001354701.2:c.4621T>A	NP_001341630.1:p.Leu1541Met
NM_001099404.2:c.4678T>A MANE Plus Clinical	NP_001092874.1:p.Leu1560Met
NM_001099405.2:c.4624T>A	NP_001092875.1:p.Leu1542Met
NM_001160161.2:c.4516T>A	NP_001153633.1:p.Leu1506Met
NM_198056.3:c.4678T>A	NP_932173.1:p.Leu1560Met