Canonical Allele Identifier: CA349078042

Gene: SCN9A SCN1A-AS1

Linked Data

• MyVariant Identifiers: chr2:g.167133796C>A (hg19) ; chr2:g.166277286C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166277286C>A , CM000664.2:g.166277286C>A	GRCh38
NC_000002.11:g.167133796C>A , CM000664.1:g.167133796C>A	GRCh37
NC_000002.10:g.166842042C>A	NCBI36
NG_012798.1:g.103702G>T , LRG_369:g.103702G>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000303354.11:c.2571G>T (SCN9A)	ENSP00000304748.7:p.Lys857Asn
ENST00000409435.6:c.2571G>T (SCN9A)	ENSP00000386330.2:p.Lys857Asn
ENST00000642356.2:c.2571G>T (SCN9A) MANE Select	ENSP00000495601.1:p.Lys857Asn
ENST00000644316.1:c.2538G>T (SCN9A)	ENSP00000493939.1:p.Lys846Asn
ENST00000645283.1:c.228G>T (SCN9A)	ENSP00000496086.1:p.Lys76Asn
ENST00000645907.1:c.2538G>T (SCN9A)	ENSP00000495983.1:p.Lys846Asn
ENST00000667201.2:c.1573G>T (SCN9A)
ENST00000303354.10:c.2571G>T (SCN9A)	ENSP00000304748.7:p.Lys857Asn
ENST00000409435.5:c.2571G>T (SCN9A)	ENSP00000386330.1:p.Lys857Asn
ENST00000409672.5:c.2538G>T (SCN9A)	ENSP00000386306.1:p.Lys846Asn
NM_002977.3:c.2538G>T , LRG_369t1:c.2538G>T (SCN9A)	NP_002968.1:p.Lys846Asn
NR_110260.1:n.1029+39C>A (SCN1A-AS1)
XM_005246757.1:c.2571G>T (SCN9A)	XP_005246814.1:p.Lys857Asn
XM_011511616.1:c.2571G>T (SCN9A)	XP_011509918.1:p.Lys857Asn
XM_011511617.1:c.2571G>T (SCN9A)	XP_011509919.1:p.Lys857Asn
XM_011511618.1:c.2538G>T (SCN9A)	XP_011509920.1:p.Lys846Asn
XM_011511619.1:c.2571G>T (SCN9A)	XP_011509921.1:p.Lys857Asn
NM_001365536.1:c.2571G>T (SCN9A) MANE Select	NP_001352465.1:p.Lys857Asn
XM_011511616.3:c.2571G>T (SCN9A)	XP_011509918.1:p.Lys857Asn
XM_011511617.2:c.2571G>T (SCN9A)	XP_011509919.1:p.Lys857Asn
XM_011511618.2:c.2538G>T (SCN9A)	XP_011509920.1:p.Lys846Asn
XM_011511619.2:c.2571G>T (SCN9A)	XP_011509921.1:p.Lys857Asn
XM_017004668.1:c.2184G>T (SCN9A)	XP_016860157.1:p.Lys728Asn
XM_017004669.1:c.1827G>T (SCN9A)	XP_016860158.1:p.Lys609Asn
XR_001738886.1:n.2885G>T (SCN9A)