Canonical Allele Identifier: CA349028804

Gene: SCN2A

Linked Data

• MyVariant Identifiers: chr2:g.166229752A>C (hg19) ; chr2:g.165373242A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165373242A>C , CM000664.2:g.165373242A>C	GRCh38
NC_000002.11:g.166229752A>C , CM000664.1:g.166229752A>C	GRCh37
NC_000002.10:g.165937998A>C	NCBI36
NG_008143.1:g.138841A>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000631182.3:c.3867A>C MANE Plus Clinical	ENSP00000486885.1:p.Leu1289Phe
ENST00000375437.7:c.3867A>C MANE Select	ENSP00000364586.2:p.Leu1289Phe
ENST00000636071.2:c.3867A>C	ENSP00000490107.1:p.Leu1289Phe
ENST00000636135.1:c.*2186A>C	ENSP00000489821.1:n.*2186A>C
ENST00000636384.2:c.*1854A>C	ENSP00000490765.1:n.*1854A>C
ENST00000636662.2:c.*4390A>C	ENSP00000489873.1:n.*4390A>C
ENST00000636769.1:c.*1809A>C	ENSP00000490800.1:n.*1809A>C
ENST00000636985.2:c.3471A>C	ENSP00000490849.1:p.Leu1157Phe
ENST00000637266.2:c.3867A>C	ENSP00000490866.1:p.Leu1289Phe
ENST00000283256.10:c.3867A>C	ENSP00000283256.6:p.Leu1289Phe
ENST00000375427.4:c.3867A>C	ENSP00000364576.2:p.Leu1289Phe
ENST00000375437.6:c.3867A>C	ENSP00000364586.2:p.Leu1289Phe
ENST00000480032.4:n.6935A>C
ENST00000631182.2:c.3867A>C	ENSP00000486885.1:p.Leu1289Phe
NM_001040142.1:c.3867A>C	NP_001035232.1:p.Leu1289Phe
NM_001040143.1:c.3867A>C	NP_001035233.1:p.Leu1289Phe
NM_021007.2:c.3867A>C	NP_066287.2:p.Leu1289Phe
XM_005246750.2:c.3867A>C	XP_005246807.1:p.Leu1289Phe
XM_005246753.2:c.3867A>C	XP_005246810.1:p.Leu1289Phe
XM_005246754.3:c.3837A>C	XP_005246811.1:p.Leu1279Phe
XM_005246755.3:c.3114A>C	XP_005246812.1:p.Leu1038Phe
XM_011511608.1:c.3867A>C	XP_011509910.1:p.Leu1289Phe
XM_011511609.1:c.3867A>C	XP_011509911.1:p.Leu1289Phe
XM_005246753.3:c.3867A>C	XP_005246810.1:p.Leu1289Phe
XM_017004656.1:c.3867A>C	XP_016860145.1:p.Leu1289Phe
XM_017004657.1:c.3867A>C	XP_016860146.1:p.Leu1289Phe
XM_017004658.1:c.3114A>C	XP_016860147.1:p.Leu1038Phe
XM_017004659.1:c.1665A>C	XP_016860148.1:p.Leu555Phe
XM_024453037.1:c.3114A>C	XP_024308805.1:p.Leu1038Phe
NM_001040142.2:c.3867A>C MANE Select	NP_001035232.1:p.Leu1289Phe
NM_001040143.2:c.3867A>C	NP_001035233.1:p.Leu1289Phe
NM_001371246.1:c.3867A>C MANE Plus Clinical	NP_001358175.1:p.Leu1289Phe
NM_001371247.1:c.3867A>C	NP_001358176.1:p.Leu1289Phe
NM_021007.3:c.3867A>C	NP_066287.2:p.Leu1289Phe