Canonical Allele Identifier: CA349017598

Gene: SCN2A

Linked Data

• MyVariant Identifiers: chr2:g.166165942C>T (hg19) ; chr2:g.165309432C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165309432C>T , CM000664.2:g.165309432C>T	GRCh38
NC_000002.11:g.166165942C>T , CM000664.1:g.166165942C>T	GRCh37
NC_000002.10:g.165874188C>T	NCBI36
NG_008143.1:g.75031C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000631182.3:c.697+176C>T MANE Plus Clinical	ENSP00000486885.1:n.697+176C>T
ENST00000375437.7:c.686C>T MANE Select	ENSP00000364586.2:p.Ser229Leu
ENST00000635945.1:n.1049C>T
ENST00000636071.2:c.697+176C>T	ENSP00000490107.1:n.697+176C>T
ENST00000636135.1:c.557C>T	ENSP00000489821.1:p.Ser186Leu
ENST00000636384.2:c.686C>T	ENSP00000490765.1:p.Ser229Leu
ENST00000636662.2:c.*1209C>T	ENSP00000489873.1:n.*1209C>T
ENST00000636769.1:c.686C>T	ENSP00000490800.1:p.Ser229Leu
ENST00000636985.2:c.290C>T	ENSP00000490849.1:p.Ser97Leu
ENST00000637266.2:c.686C>T	ENSP00000490866.1:p.Ser229Leu
ENST00000637367.1:c.*619C>T	ENSP00000490592.1:n.*619C>T
ENST00000638151.1:n.770C>T
ENST00000283256.10:c.686C>T	ENSP00000283256.6:p.Ser229Leu
ENST00000375427.4:c.697+176C>T	ENSP00000364576.2:n.697+176C>T
ENST00000375437.6:c.686C>T	ENSP00000364586.2:p.Ser229Leu
ENST00000424833.5:c.686C>T	ENSP00000406454.2:p.Ser229Leu
ENST00000480032.4:n.829C>T
ENST00000486878.2:c.227C>T	ENSP00000487466.1:p.Ser76Leu
ENST00000631182.2:c.697+176C>T	ENSP00000486885.1:n.697+176C>T
NM_001040142.1:c.686C>T	NP_001035232.1:p.Ser229Leu
NM_001040143.1:c.697+176C>T	NP_001035233.1:n.697+176C>T
NM_021007.2:c.686C>T	NP_066287.2:p.Ser229Leu
XM_005246750.2:c.686C>T	XP_005246807.1:p.Ser229Leu
XM_005246753.2:c.697+176C>T	XP_005246810.1:n.697+176C>T
XM_005246754.3:c.656C>T	XP_005246811.1:p.Ser219Leu
XM_005246755.3:c.-57+638C>T	XP_005246812.1:n.-57+638C>T
XM_011511608.1:c.686C>T	XP_011509910.1:p.Ser229Leu
XM_011511609.1:c.686C>T	XP_011509911.1:p.Ser229Leu
XM_005246753.3:c.697+176C>T	XP_005246810.1:n.697+176C>T
XM_017004656.1:c.686C>T	XP_016860145.1:p.Ser229Leu
XM_017004657.1:c.697+176C>T	XP_016860146.1:n.697+176C>T
XM_017004658.1:c.-68C>T	XP_016860147.1:n.-68C>T
XM_024453037.1:c.-57+638C>T	XP_024308805.1:n.-57+638C>T
NM_001040142.2:c.686C>T MANE Select	NP_001035232.1:p.Ser229Leu
NM_001040143.2:c.697+176C>T	NP_001035233.1:n.697+176C>T
NM_001371246.1:c.697+176C>T MANE Plus Clinical	NP_001358175.1:n.697+176C>T
NM_001371247.1:c.686C>T	NP_001358176.1:p.Ser229Leu
NM_021007.3:c.686C>T	NP_066287.2:p.Ser229Leu