Canonical Allele Identifier: CA346761585

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 2766626
• ClinVar RCV Id: RCV003594480
• dbSNP Id: rs2104567294
• MyVariant Identifiers: chr2:g.48033774T>A (hg19) ; chr2:g.47806635T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806635T>A , CM000664.2:g.47806635T>A	GRCh38
NC_000002.11:g.48033774T>A , CM000664.1:g.48033774T>A	GRCh37
NC_000002.10:g.47887278T>A	NCBI36
NG_007111.1:g.28489T>A , LRG_219:g.28489T>A
NG_008397.1:g.104041A>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.3688T>A (MSH6)	ENSP00000406248.2:p.Ser1230Thr
ENST00000420813.6:c.3688T>A (MSH6)	ENSP00000390382.2:p.Ser1230Thr
ENST00000455383.6:c.3688T>A (MSH6)	ENSP00000397484.2:p.Ser1230Thr
ENST00000700004.2:c.3601T>A (MSH6)	ENSP00000514752.2:p.Ser1201Thr
ENST00000699999.1:n.4659T>A (MSH6)
ENST00000700000.1:c.2419T>A (MSH6)	ENSP00000514749.1:p.Ser807Thr
ENST00000700002.1:c.3991T>A (MSH6)	ENSP00000514750.1:p.Ser1331Thr
ENST00000700003.1:c.1440T>A (MSH6)	ENSP00000514751.1:n.1440T>A
ENST00000700004.1:c.2758T>A (MSH6)	ENSP00000514752.1:p.Ser920Thr
ENST00000700005.1:n.2836T>A (MSH6)
ENST00000700006.1:n.5143T>A (MSH6)
ENST00000700007.1:n.2580T>A (MSH6)
ENST00000700008.1:n.2247T>A (MSH6)
ENST00000700009.1:n.2649T>A (MSH6)
ENST00000700010.1:n.1394T>A (MSH6)
ENST00000700011.1:n.3279T>A (MSH6)
ENST00000682451.1:n.4113A>T (FBXO11)
ENST00000684712.1:n.4375A>T (FBXO11)
ENST00000234420.11:c.3985T>A (MSH6) MANE Select	ENSP00000234420.5:p.Ser1329Thr
ENST00000540021.6:c.3595T>A (MSH6)	ENSP00000446475.1:p.Ser1199Thr
ENST00000652107.1:c.3688T>A (MSH6)	ENSP00000498629.1:p.Ser1230Thr
ENST00000673637.1:c.3688T>A (MSH6)	ENSP00000501310.1:p.Ser1230Thr
ENST00000234420.9:c.3985T>A (MSH6)	ENSP00000234420.4:p.Ser1329Thr
ENST00000405808.5:c.169+1560A>T (FBXO11)	ENSP00000385127.1:n.169+1560A>T
ENST00000434234.5:c.*124+1359A>T (FBXO11)	ENSP00000402692.1:n.*124+1359A>T
ENST00000445503.5:c.*3332T>A (MSH6)	ENSP00000405294.1:n.*3332T>A
ENST00000538136.1:c.3079T>A (MSH6)	ENSP00000438580.1:p.Ser1027Thr
ENST00000540021.5:c.3595T>A (MSH6)	ENSP00000446475.1:p.Ser1199Thr
ENST00000614496.4:c.3079T>A (MSH6)	ENSP00000477844.1:p.Ser1027Thr
ENST00000622629.4:c.886T>A (MSH6)	ENSP00000482078.1:p.Ser296Thr
NM_000179.2:c.3985T>A , LRG_219t1:c.3985T>A (MSH6)	NP_000170.1:p.Ser1329Thr
NM_001281492.1:c.3595T>A (MSH6)	NP_001268421.1:p.Ser1199Thr
NM_001281493.1:c.3079T>A (MSH6)	NP_001268422.1:p.Ser1027Thr
NM_001281494.1:c.3079T>A (MSH6)	NP_001268423.1:p.Ser1027Thr
XM_005264271.1:c.3688T>A (MSH6)	XP_005264328.1:p.Ser1230Thr
XM_011532798.1:c.3802T>A (MSH6)	XP_011531100.1:p.Ser1268Thr
XM_011532799.1:c.3688T>A (MSH6)	XP_011531101.1:p.Ser1230Thr
XM_011532800.1:c.3688T>A (MSH6)	XP_011531102.1:p.Ser1230Thr
XM_024452819.1:c.4078T>A (MSH6)	XP_024308587.1:p.Ser1360Thr
XM_024452820.1:c.3895T>A (MSH6)	XP_024308588.1:p.Ser1299Thr
XM_024452821.1:c.3781T>A (MSH6)	XP_024308589.1:p.Ser1261Thr
XM_024452822.1:c.3172T>A (MSH6)	XP_024308590.1:p.Ser1058Thr
NM_000179.3:c.3985T>A (MSH6) MANE Select	NP_000170.1:p.Ser1329Thr
NM_001281492.2:c.3595T>A (MSH6)	NP_001268421.1:p.Ser1199Thr
NM_001281493.2:c.3079T>A (MSH6)	NP_001268422.1:p.Ser1027Thr
NM_001281494.2:c.3079T>A (MSH6)	NP_001268423.1:p.Ser1027Thr