Canonical Allele Identifier: CA346761372

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 1402229
• ClinVar RCV Id: RCV001896902
• dbSNP Id: rs764835191
• gnomAD v4: 2-47806528-C-A
• MyVariant Identifiers: chr2:g.48033667C>A (hg19) ; chr2:g.47806528C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806528C>A , CM000664.2:g.47806528C>A	GRCh38
NC_000002.11:g.48033667C>A , CM000664.1:g.48033667C>A	GRCh37
NC_000002.10:g.47887171C>A	NCBI36
NG_007111.1:g.28382C>A , LRG_219:g.28382C>A
NG_008397.1:g.104148G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.3581C>A (MSH6)	ENSP00000406248.2:p.Ala1194Asp
ENST00000420813.6:c.3581C>A (MSH6)	ENSP00000390382.2:p.Ala1194Asp
ENST00000455383.6:c.3581C>A (MSH6)	ENSP00000397484.2:p.Ala1194Asp
ENST00000700004.2:c.3494C>A (MSH6)	ENSP00000514752.2:p.Ala1165Asp
ENST00000699999.1:n.4552C>A (MSH6)
ENST00000700000.1:c.2312C>A (MSH6)	ENSP00000514749.1:p.Ala771Asp
ENST00000700002.1:c.3884C>A (MSH6)	ENSP00000514750.1:p.Ala1295Asp
ENST00000700003.1:c.1333C>A (MSH6)	ENSP00000514751.1:n.1333C>A
ENST00000700004.1:c.2651C>A (MSH6)	ENSP00000514752.1:p.Ala884Asp
ENST00000700005.1:n.2729C>A (MSH6)
ENST00000700006.1:n.5036C>A (MSH6)
ENST00000700007.1:n.2473C>A (MSH6)
ENST00000700008.1:n.2140C>A (MSH6)
ENST00000700009.1:n.2542C>A (MSH6)
ENST00000700010.1:n.1287C>A (MSH6)
ENST00000700011.1:n.3172C>A (MSH6)
ENST00000682451.1:n.4220G>T (FBXO11)
ENST00000684712.1:n.4482G>T (FBXO11)
ENST00000234420.11:c.3878C>A (MSH6) MANE Select	ENSP00000234420.5:p.Ala1293Asp
ENST00000540021.6:c.3488C>A (MSH6)	ENSP00000446475.1:p.Ala1163Asp
ENST00000652107.1:c.3581C>A (MSH6)	ENSP00000498629.1:p.Ala1194Asp
ENST00000673637.1:c.3581C>A (MSH6)	ENSP00000501310.1:p.Ala1194Asp
ENST00000234420.9:c.3878C>A (MSH6)	ENSP00000234420.4:p.Ala1293Asp
ENST00000405808.5:c.169+1667G>T (FBXO11)	ENSP00000385127.1:n.169+1667G>T
ENST00000434234.5:c.*124+1466G>T (FBXO11)	ENSP00000402692.1:n.*124+1466G>T
ENST00000445503.5:c.*3225C>A (MSH6)	ENSP00000405294.1:n.*3225C>A
ENST00000538136.1:c.2972C>A (MSH6)	ENSP00000438580.1:p.Ala991Asp
ENST00000540021.5:c.3488C>A (MSH6)	ENSP00000446475.1:p.Ala1163Asp
ENST00000614496.4:c.2972C>A (MSH6)	ENSP00000477844.1:p.Ala991Asp
ENST00000622629.4:c.779C>A (MSH6)	ENSP00000482078.1:p.Ala260Asp
NM_000179.2:c.3878C>A , LRG_219t1:c.3878C>A (MSH6)	NP_000170.1:p.Ala1293Asp
NM_001281492.1:c.3488C>A (MSH6)	NP_001268421.1:p.Ala1163Asp
NM_001281493.1:c.2972C>A (MSH6)	NP_001268422.1:p.Ala991Asp
NM_001281494.1:c.2972C>A (MSH6)	NP_001268423.1:p.Ala991Asp
XM_005264271.1:c.3581C>A (MSH6)	XP_005264328.1:p.Ala1194Asp
XM_011532798.1:c.3695C>A (MSH6)	XP_011531100.1:p.Ala1232Asp
XM_011532799.1:c.3581C>A (MSH6)	XP_011531101.1:p.Ala1194Asp
XM_011532800.1:c.3581C>A (MSH6)	XP_011531102.1:p.Ala1194Asp
XM_024452819.1:c.3971C>A (MSH6)	XP_024308587.1:p.Ala1324Asp
XM_024452820.1:c.3788C>A (MSH6)	XP_024308588.1:p.Ala1263Asp
XM_024452821.1:c.3674C>A (MSH6)	XP_024308589.1:p.Ala1225Asp
XM_024452822.1:c.3065C>A (MSH6)	XP_024308590.1:p.Ala1022Asp
NM_000179.3:c.3878C>A (MSH6) MANE Select	NP_000170.1:p.Ala1293Asp
NM_001281492.2:c.3488C>A (MSH6)	NP_001268421.1:p.Ala1163Asp
NM_001281493.2:c.2972C>A (MSH6)	NP_001268422.1:p.Ala991Asp
NM_001281494.2:c.2972C>A (MSH6)	NP_001268423.1:p.Ala991Asp