Canonical Allele Identifier: CA346761053

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 2773666
• ClinVar RCV Id: RCV003585639
• dbSNP Id: rs769360577
• MyVariant Identifiers: chr2:g.48033435A>T (hg19) ; chr2:g.47806296A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806296A>T , CM000664.2:g.47806296A>T	GRCh38
NC_000002.11:g.48033435A>T , CM000664.1:g.48033435A>T	GRCh37
NC_000002.10:g.47886939A>T	NCBI36
NG_007111.1:g.28150A>T , LRG_219:g.28150A>T
NG_008397.1:g.104380T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.3442A>T (MSH6)	ENSP00000406248.2:p.Thr1148Ser
ENST00000420813.6:c.3442A>T (MSH6)	ENSP00000390382.2:p.Thr1148Ser
ENST00000455383.6:c.3442A>T (MSH6)	ENSP00000397484.2:p.Thr1148Ser
ENST00000700004.2:c.3355A>T (MSH6)	ENSP00000514752.2:p.Thr1119Ser
ENST00000699999.1:n.4413A>T (MSH6)
ENST00000700000.1:c.2173A>T (MSH6)	ENSP00000514749.1:p.Thr725Ser
ENST00000700002.1:c.3745A>T (MSH6)	ENSP00000514750.1:p.Thr1249Ser
ENST00000700003.1:c.1194A>T (MSH6)	ENSP00000514751.1:n.1194A>T
ENST00000700004.1:c.2512A>T (MSH6)	ENSP00000514752.1:p.Thr838Ser
ENST00000700005.1:n.2590A>T (MSH6)
ENST00000700006.1:n.4897A>T (MSH6)
ENST00000700007.1:n.2334A>T (MSH6)
ENST00000700008.1:n.1908A>T (MSH6)
ENST00000700009.1:n.2403A>T (MSH6)
ENST00000700010.1:n.1148A>T (MSH6)
ENST00000700011.1:n.3033A>T (MSH6)
ENST00000682451.1:n.4452T>A (FBXO11)
ENST00000684712.1:n.4714T>A (FBXO11)
ENST00000234420.11:c.3739A>T (MSH6) MANE Select	ENSP00000234420.5:p.Thr1247Ser
ENST00000540021.6:c.3349A>T (MSH6)	ENSP00000446475.1:p.Thr1117Ser
ENST00000652107.1:c.3442A>T (MSH6)	ENSP00000498629.1:p.Thr1148Ser
ENST00000673637.1:c.3442A>T (MSH6)	ENSP00000501310.1:p.Thr1148Ser
ENST00000234420.9:c.3739A>T (MSH6)	ENSP00000234420.4:p.Thr1247Ser
ENST00000405808.5:c.169+1899T>A (FBXO11)	ENSP00000385127.1:n.169+1899T>A
ENST00000434234.5:c.*124+1698T>A (FBXO11)	ENSP00000402692.1:n.*124+1698T>A
ENST00000445503.5:c.*3086A>T (MSH6)	ENSP00000405294.1:n.*3086A>T
ENST00000538136.1:c.2833A>T (MSH6)	ENSP00000438580.1:p.Thr945Ser
ENST00000540021.5:c.3349A>T (MSH6)	ENSP00000446475.1:p.Thr1117Ser
ENST00000614496.4:c.2833A>T (MSH6)	ENSP00000477844.1:p.Thr945Ser
ENST00000622629.4:c.643A>T (MSH6)	ENSP00000482078.1:p.Thr215Ser
NM_000179.2:c.3739A>T , LRG_219t1:c.3739A>T (MSH6)	NP_000170.1:p.Thr1247Ser
NM_001281492.1:c.3349A>T (MSH6)	NP_001268421.1:p.Thr1117Ser
NM_001281493.1:c.2833A>T (MSH6)	NP_001268422.1:p.Thr945Ser
NM_001281494.1:c.2833A>T (MSH6)	NP_001268423.1:p.Thr945Ser
XM_005264271.1:c.3442A>T (MSH6)	XP_005264328.1:p.Thr1148Ser
XM_011532798.1:c.3556A>T (MSH6)	XP_011531100.1:p.Thr1186Ser
XM_011532799.1:c.3442A>T (MSH6)	XP_011531101.1:p.Thr1148Ser
XM_011532800.1:c.3442A>T (MSH6)	XP_011531102.1:p.Thr1148Ser
XM_024452819.1:c.3739A>T (MSH6)	XP_024308587.1:p.Thr1247Ser
XM_024452820.1:c.3556A>T (MSH6)	XP_024308588.1:p.Thr1186Ser
XM_024452821.1:c.3442A>T (MSH6)	XP_024308589.1:p.Thr1148Ser
XM_024452822.1:c.2833A>T (MSH6)	XP_024308590.1:p.Thr945Ser
NM_000179.3:c.3739A>T (MSH6) MANE Select	NP_000170.1:p.Thr1247Ser
NM_001281492.2:c.3349A>T (MSH6)	NP_001268421.1:p.Thr1117Ser
NM_001281493.2:c.2833A>T (MSH6)	NP_001268422.1:p.Thr945Ser
NM_001281494.2:c.2833A>T (MSH6)	NP_001268423.1:p.Thr945Ser