Canonical Allele Identifier: CA346760271

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 1062452
• ClinVar RCV Id: RCV001372169
• dbSNP Id: rs1376983554
• MyVariant Identifiers: chr2:g.48032162G>C (hg19) ; chr2:g.47805023G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47805023G>C , CM000664.2:g.47805023G>C	GRCh38
NC_000002.11:g.48032162G>C , CM000664.1:g.48032162G>C	GRCh37
NC_000002.10:g.47885666G>C	NCBI36
NG_007111.1:g.26877G>C , LRG_219:g.26877G>C
NG_008397.1:g.105653C>G

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.3255G>C (MSH6)	ENSP00000406248.2:p.Met1085Ile
ENST00000420813.6:c.3255G>C (MSH6)	ENSP00000390382.2:p.Met1085Ile
ENST00000455383.6:c.3255G>C (MSH6)	ENSP00000397484.2:p.Met1085Ile
ENST00000700004.2:c.3173-595G>C (MSH6)	ENSP00000514752.2:n.3173-595G>C
ENST00000699999.1:n.3636G>C (MSH6)
ENST00000700000.1:c.1986G>C (MSH6)	ENSP00000514749.1:p.Met662Ile
ENST00000700002.1:c.3558G>C (MSH6)	ENSP00000514750.1:p.Met1186Ile
ENST00000700003.1:c.1007G>C (MSH6)	ENSP00000514751.1:n.1007G>C
ENST00000700004.1:c.2330-595G>C (MSH6)	ENSP00000514752.1:n.2330-595G>C
ENST00000700005.1:n.2403G>C (MSH6)
ENST00000700006.1:n.3624G>C (MSH6)
ENST00000700007.1:n.1557G>C (MSH6)
ENST00000700008.1:n.1131G>C (MSH6)
ENST00000700009.1:n.1130G>C (MSH6)
ENST00000700010.1:n.961G>C (MSH6)
ENST00000700011.1:n.2256G>C (MSH6)
ENST00000234420.11:c.3552G>C (MSH6) MANE Select	ENSP00000234420.5:p.Met1184Ile
ENST00000540021.6:c.3162G>C (MSH6)	ENSP00000446475.1:p.Met1054Ile
ENST00000652107.1:c.3255G>C (MSH6)	ENSP00000498629.1:p.Met1085Ile
ENST00000673637.1:c.3255G>C (MSH6)	ENSP00000501310.1:p.Met1085Ile
ENST00000234420.9:c.3552G>C (MSH6)	ENSP00000234420.4:p.Met1184Ile
ENST00000405808.5:c.169+3172C>G (FBXO11)	ENSP00000385127.1:n.169+3172C>G
ENST00000434234.5:c.*124+2971C>G (FBXO11)	ENSP00000402692.1:n.*124+2971C>G
ENST00000445503.5:c.*2899G>C (MSH6)	ENSP00000405294.1:n.*2899G>C
ENST00000538136.1:c.2646G>C (MSH6)	ENSP00000438580.1:p.Met882Ile
ENST00000540021.5:c.3162G>C (MSH6)	ENSP00000446475.1:p.Met1054Ile
ENST00000614496.4:c.2646G>C (MSH6)	ENSP00000477844.1:p.Met882Ile
ENST00000622629.4:c.456G>C (MSH6)	ENSP00000482078.1:p.Met152Ile
NM_000179.2:c.3552G>C , LRG_219t1:c.3552G>C (MSH6)	NP_000170.1:p.Met1184Ile
NM_001281492.1:c.3162G>C (MSH6)	NP_001268421.1:p.Met1054Ile
NM_001281493.1:c.2646G>C (MSH6)	NP_001268422.1:p.Met882Ile
NM_001281494.1:c.2646G>C (MSH6)	NP_001268423.1:p.Met882Ile
XM_005264271.1:c.3255G>C (MSH6)	XP_005264328.1:p.Met1085Ile
XM_011532798.1:c.3369G>C (MSH6)	XP_011531100.1:p.Met1123Ile
XM_011532799.1:c.3255G>C (MSH6)	XP_011531101.1:p.Met1085Ile
XM_011532800.1:c.3255G>C (MSH6)	XP_011531102.1:p.Met1085Ile
XM_024452819.1:c.3552G>C (MSH6)	XP_024308587.1:p.Met1184Ile
XM_024452820.1:c.3369G>C (MSH6)	XP_024308588.1:p.Met1123Ile
XM_024452821.1:c.3255G>C (MSH6)	XP_024308589.1:p.Met1085Ile
XM_024452822.1:c.2646G>C (MSH6)	XP_024308590.1:p.Met882Ile
NM_000179.3:c.3552G>C (MSH6) MANE Select	NP_000170.1:p.Met1184Ile
NM_001281492.2:c.3162G>C (MSH6)	NP_001268421.1:p.Met1054Ile
NM_001281493.2:c.2646G>C (MSH6)	NP_001268422.1:p.Met882Ile
NM_001281494.2:c.2646G>C (MSH6)	NP_001268423.1:p.Met882Ile