Canonical Allele Identifier: CA346747012

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 960050
• ClinVar RCV Id: RCV001233505
• dbSNP Id: rs1390820576
• gnomAD v2: 2-48026732-A-C
• gnomAD v3: 2-47799593-A-C
• gnomAD v4: 2-47799593-A-C
• MyVariant Identifiers: chr2:g.48026732A>C (hg19) ; chr2:g.47799593A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799593A>C , CM000664.2:g.47799593A>C	GRCh38
NC_000002.11:g.48026732A>C , CM000664.1:g.48026732A>C	GRCh37
NC_000002.10:g.47880236A>C	NCBI36
NG_007111.1:g.21447A>C , LRG_219:g.21447A>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.1313A>C (MSH6)	ENSP00000406248.2:p.Lys438Thr
ENST00000420813.6:c.1313A>C (MSH6)	ENSP00000390382.2:p.Lys438Thr
ENST00000455383.6:c.1313A>C (MSH6)	ENSP00000397484.2:p.Lys438Thr
ENST00000700004.2:c.1610A>C (MSH6)	ENSP00000514752.2:p.Lys537Thr
ENST00000699999.1:n.1694A>C (MSH6)
ENST00000700000.1:c.1606+4A>C (MSH6)	ENSP00000514749.1:n.1606+4A>C
ENST00000700002.1:c.1616A>C (MSH6)	ENSP00000514750.1:p.Lys539Thr
ENST00000700003.1:c.627+3530A>C (MSH6)	ENSP00000514751.1:n.627+3530A>C
ENST00000700004.1:c.767A>C (MSH6)	ENSP00000514752.1:p.Lys256Thr
ENST00000234420.11:c.1610A>C (MSH6) MANE Select	ENSP00000234420.5:p.Lys537Thr
ENST00000540021.6:c.1220A>C (MSH6)	ENSP00000446475.1:p.Lys407Thr
ENST00000652107.1:c.1313A>C (MSH6)	ENSP00000498629.1:p.Lys438Thr
ENST00000673637.1:c.1313A>C (MSH6)	ENSP00000501310.1:p.Lys438Thr
ENST00000234420.9:c.1610A>C (MSH6)	ENSP00000234420.4:p.Lys537Thr
ENST00000405808.5:c.169+8602T>G (FBXO11)	ENSP00000385127.1:n.169+8602T>G
ENST00000434234.5:c.*124+8401T>G (FBXO11)	ENSP00000402692.1:n.*124+8401T>G
ENST00000445503.5:c.*957A>C (MSH6)	ENSP00000405294.1:n.*957A>C
ENST00000538136.1:c.704A>C (MSH6)	ENSP00000438580.1:p.Lys235Thr
ENST00000540021.5:c.1220A>C (MSH6)	ENSP00000446475.1:p.Lys407Thr
ENST00000614496.4:c.704A>C (MSH6)	ENSP00000477844.1:p.Lys235Thr
ENST00000616033.4:c.1607A>C (MSH6)	ENSP00000480261.1:p.Lys536Thr
ENST00000622629.4:c.-1487A>C (MSH6)	ENSP00000482078.1:n.-1487A>C
NM_000179.2:c.1610A>C , LRG_219t1:c.1610A>C (MSH6)	NP_000170.1:p.Lys537Thr
NM_001281492.1:c.1220A>C (MSH6)	NP_001268421.1:p.Lys407Thr
NM_001281493.1:c.704A>C (MSH6)	NP_001268422.1:p.Lys235Thr
NM_001281494.1:c.704A>C (MSH6)	NP_001268423.1:p.Lys235Thr
XM_005264271.1:c.1313A>C (MSH6)	XP_005264328.1:p.Lys438Thr
XM_011532798.1:c.1427A>C (MSH6)	XP_011531100.1:p.Lys476Thr
XM_011532799.1:c.1313A>C (MSH6)	XP_011531101.1:p.Lys438Thr
XM_011532800.1:c.1313A>C (MSH6)	XP_011531102.1:p.Lys438Thr
XM_024452819.1:c.1610A>C (MSH6)	XP_024308587.1:p.Lys537Thr
XM_024452820.1:c.1427A>C (MSH6)	XP_024308588.1:p.Lys476Thr
XM_024452821.1:c.1313A>C (MSH6)	XP_024308589.1:p.Lys438Thr
XM_024452822.1:c.704A>C (MSH6)	XP_024308590.1:p.Lys235Thr
NM_000179.3:c.1610A>C (MSH6) MANE Select	NP_000170.1:p.Lys537Thr
NM_001281492.2:c.1220A>C (MSH6)	NP_001268421.1:p.Lys407Thr
NM_001281493.2:c.704A>C (MSH6)	NP_001268422.1:p.Lys235Thr
NM_001281494.2:c.704A>C (MSH6)	NP_001268423.1:p.Lys235Thr