Canonical Allele Identifier: CA346743112

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• MyVariant Identifiers: chr2:g.48914906G>T (hg19) ; chr2:g.48687767G>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48687767G>T , CM000664.2:g.48687767G>T	GRCh38
NC_000002.11:g.48914906G>T , CM000664.1:g.48914906G>T	GRCh37
NC_000002.10:g.48768410G>T	NCBI36
NG_008193.1:g.72975C>A
NG_033050.1:g.162843G>T
NG_008193.2:g.72975C>A
NG_033050.2:g.162843G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.2030C>A (LHCGR) MANE Select	ENSP00000294954.6:p.Thr677Asn
ENST00000294954.11:c.2030C>A (LHCGR)	ENSP00000294954.6:p.Thr677Asn
ENST00000401907.5:c.*342C>A (LHCGR)	ENSP00000385406.1:n.*342C>A
ENST00000402114.6:c.3441+16087G>T (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16087G>T
ENST00000403273.5:c.*774C>A (LHCGR)	ENSP00000385847.1:n.*774C>A
ENST00000405626.5:c.1949C>A (LHCGR)	ENSP00000386033.1:p.Thr650Asn
ENST00000508440.1:c.276+16087G>T (GTF2A1L)	ENSP00000421474.1:n.276+16087G>T
ENST00000602369.3:c.*220+6457C>A	ENSP00000473498.1:n.*220+6457C>A
NM_000233.3:c.2030C>A (LHCGR)	NP_000224.2:p.Thr677Asn
NM_001198593.1:c.3441+16087G>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16087G>T
XM_005264309.2:c.1073C>A (LHCGR)	XP_005264366.1:p.Thr358Asn
XM_006712015.2:c.1100C>A (LHCGR)	XP_006712078.1:p.Thr367Asn
XM_011532828.1:c.1955C>A (LHCGR)	XP_011531130.1:p.Thr652Asn
XM_011532829.1:c.1769C>A (LHCGR)	XP_011531131.1:p.Thr590Asn
XM_011532830.1:c.1688C>A (LHCGR)	XP_011531132.1:p.Thr563Asn
XM_011532831.1:c.1394C>A (LHCGR)	XP_011531133.1:p.Thr465Asn
XM_011532832.1:c.1100C>A (LHCGR)	XP_011531134.1:p.Thr367Asn
XM_011532833.1:c.1100C>A (LHCGR)	XP_011531135.1:p.Thr367Asn
XM_011532834.1:c.1073C>A (LHCGR)	XP_011531136.1:p.Thr358Asn
XM_005264309.3:c.1073C>A (LHCGR)	XP_005264366.1:p.Thr358Asn
XM_006712015.3:c.1100C>A (LHCGR)	XP_006712078.1:p.Thr367Asn
XM_011532834.2:c.1073C>A (LHCGR)	XP_011531136.1:p.Thr358Asn
XM_017004089.1:c.1775C>A (LHCGR)	XP_016859578.1:p.Thr592Asn
XM_017004090.1:c.1394C>A (LHCGR)	XP_016859579.1:p.Thr465Asn
NM_000233.4:c.2030C>A (LHCGR) MANE Select	NP_000224.2:p.Thr677Asn
NM_001198593.2:c.3441+16087G>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16087G>T