Canonical Allele Identifier: CA346727794

Gene: MSH2

Linked Data

• dbSNP Id: rs1225503418
• gnomAD v2: 2-47693842-T-A
• gnomAD v4: 2-47466703-T-A
• MyVariant Identifiers: chr2:g.47693842T>A (hg19) ; chr2:g.47466703T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47466703T>A , CM000664.2:g.47466703T>A	GRCh38
NC_000002.11:g.47693842T>A , CM000664.1:g.47693842T>A	GRCh37
NC_000002.10:g.47547346T>A	NCBI36
NG_007110.2:g.68580T>A , LRG_218:g.68580T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000644900.2:c.1556T>A	ENSP00000495641.2:p.Phe519Tyr
ENST00000233146.7:c.1556T>A MANE Select	ENSP00000233146.2:p.Phe519Tyr
ENST00000543555.6:c.1358T>A	ENSP00000442697.1:p.Phe453Tyr
ENST00000644092.1:c.1556T>A	ENSP00000496351.1:p.Phe519Tyr
ENST00000645339.1:c.1556T>A	ENSP00000496441.1:p.Phe519Tyr
ENST00000645506.1:c.1556T>A	ENSP00000495455.1:p.Phe519Tyr
ENST00000646415.1:c.1556T>A	ENSP00000495543.1:p.Phe519Tyr
ENST00000233146.6:c.1556T>A	ENSP00000233146.2:p.Phe519Tyr
ENST00000406134.5:c.1556T>A	ENSP00000384199.1:p.Phe519Tyr
ENST00000543555.5:c.1358T>A	ENSP00000442697.1:p.Phe453Tyr
ENST00000610696.4:c.1556T>A	ENSP00000483159.1:p.Phe519Tyr
ENST00000613514.4:c.*96T>A	ENSP00000484137.1:n.*96T>A
ENST00000617333.3:c.*322T>A	ENSP00000482468.1:n.*322T>A
ENST00000617938.4:c.*528T>A	ENSP00000481158.1:n.*528T>A
ENST00000621359.2:c.1556T>A	ENSP00000481416.1:p.Phe519Tyr
NM_000251.2:c.1556T>A , LRG_218t1:c.1556T>A	NP_000242.1:p.Phe519Tyr
NM_001258281.1:c.1358T>A	NP_001245210.1:p.Phe453Tyr
XM_005264332.2:c.1556T>A	XP_005264389.2:p.Phe519Tyr
XM_011532867.1:c.1556T>A	XP_011531169.1:p.Phe519Tyr
XR_939685.1:n.1628T>A
XM_005264332.4:c.1556T>A	XP_005264389.2:p.Phe519Tyr
XM_011532867.2:c.1556T>A	XP_011531169.1:p.Phe519Tyr
XR_001738747.2:n.1618T>A
XR_939685.2:n.1618T>A
NM_000251.3:c.1556T>A MANE Select	NP_000242.1:p.Phe519Tyr