Canonical Allele Identifier: CA341703559

Gene: PTPN22 AP4B1-AS1

Linked Data

• MyVariant Identifiers: chr1:g.114377007A>T (hg19) ; chr1:g.113834385A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113834385A>T , CM000663.2:g.113834385A>T	GRCh38
NC_000001.10:g.114377007A>T , CM000663.1:g.114377007A>T	GRCh37
NC_000001.9:g.114178530A>T	NCBI36
NG_011432.1:g.42369T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000359785.10:c.1949T>A (PTPN22) MANE Select	ENSP00000352833.5:p.Ile650Asn
ENST00000359785.9:c.1949T>A (PTPN22)	ENSP00000352833.5:p.Ile650Asn
ENST00000420377.6:c.1949T>A (PTPN22)	ENSP00000388229.2:p.Ile650Asn
ENST00000460620.5:c.469-14731T>A (PTPN22)	ENSP00000433141.1:n.469-14731T>A
ENST00000484147.5:n.1990T>A (PTPN22)
ENST00000525799.1:c.1568T>A (PTPN22)	ENSP00000432674.1:p.Ile523Asn
ENST00000528414.5:c.1784T>A (PTPN22)	ENSP00000435176.1:p.Ile595Asn
ENST00000532224.5:c.*1227T>A (PTPN22)	ENSP00000431249.1:n.*1227T>A
ENST00000538253.5:c.1877T>A (PTPN22)	ENSP00000439372.2:p.Ile626Asn
NM_001193431.1:c.1941+8T>A (PTPN22)	NP_001180360.1:n.1941+8T>A
NM_001193431.2:c.1941+8T>A (PTPN22)	NP_001180360.1:n.1941+8T>A
NM_001308297.1:c.1877T>A (PTPN22)	NP_001295226.1:p.Ile626Asn
NM_012411.4:c.1784T>A (PTPN22)	NP_036543.4:p.Ile595Asn
NM_012411.5:c.1784T>A (PTPN22)	NP_036543.4:p.Ile595Asn
NM_015967.5:c.1949T>A (PTPN22)	NP_057051.3:p.Ile650Asn
NM_015967.6:c.1949T>A (PTPN22)	NP_057051.3:p.Ile650Asn
NR_125965.1:n.414+18913A>T (AP4B1-AS1)
XM_011541221.1:c.1871T>A (PTPN22)	XP_011539523.1:p.Ile624Asn
XM_011541222.1:c.1949T>A (PTPN22)	XP_011539524.1:p.Ile650Asn
XM_011541223.1:c.1949T>A (PTPN22)	XP_011539525.1:p.Ile650Asn
XM_011541224.1:c.1505T>A (PTPN22)	XP_011539526.1:p.Ile502Asn
XM_011541225.1:c.1877T>A (PTPN22)	XP_011539527.1:p.Ile626Asn
XM_011541223.2:c.1949T>A (PTPN22)	XP_011539525.1:p.Ile650Asn
XM_011541225.2:c.1877T>A (PTPN22)	XP_011539527.1:p.Ile626Asn
XM_017001004.1:c.1949T>A (PTPN22)	XP_016856493.1:p.Ile650Asn
XM_017001005.2:c.1604T>A (PTPN22)	XP_016856494.1:p.Ile535Asn
NM_015967.7:c.1949T>A (PTPN22)	NP_057051.3:p.Ile650Asn
NM_015967.8:c.1949T>A (PTPN22) MANE Select	NP_057051.4:p.Ile650Asn